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contig_metadata

11 rows where bioproject = "PRJNA379145" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA379145 · 11 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26758376 26758376 PRJNA379145_P_NODE_8121_length_1067_cov_8.368472_g7152_i0 PRJNA379145 8121 1067 8.368472 89.29159624 Thermoplasmatales archaeon 2268204 Archaea Archaea 58.5 1.65e-6   NR MFP3299986.1 2268204 g7152 i0 31.3 0.323336457357076 115 67 29 3 343 35 3 117 MFP3299986.1 single-stranded DNA-binding protein [Thermoplasmatales archaeon] diamond 345 58.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
28008164 28008164 PRJNA379145_P_NODE_30925_length_403_cov_2.754054_g28798_i0 PRJNA379145 30925 403 2.754054 11.09883762 root 1 Root_unresolved Root_unresolved 53.5 3.27e-5   NR HTT15768.1 1906666 g28798 i0 36 2.67990074441687 89 55 65.5 2 269 6 135 222 HTT15768.1 FG-GAP repeat protein [Thermoplasmata archaeon] diamond 1080 53.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28022697 28022697 PRJNA379145_P_NODE_65965_length_170_cov_1.218978_g63811_i0 PRJNA379145 65965 170 1.218978 2.0722626 Thermoplasmata archaeon 1906666 Archaea Archaea 83.6 4.35e-17   NR MFO7990738.1 1906666 g63811 i0 67.9 7.46470588235294 53 17 93.5 0 1 159 74 126 MFO7990738.1 peptide-methionine (R)-S-oxide reductase MsrB [Thermoplasmata archaeon] diamond 1269 83.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28418669 28418669 PRJNA379145_P_NODE_18886_length_623_cov_2.333898_g17063_i0 PRJNA379145 18886 623 2.333898 14.54018454 root 1 Root_unresolved Root_unresolved 63.2 9.57e-8   NR HTT15768.1 1906666 g17063 i0 33.6 1.30497592295345 143 79 63.6 5 399 4 137 274 HTT15768.1 FG-GAP repeat protein [Thermoplasmata archaeon] diamond 813 63.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29127869 29127869 PRJNA379145_P_NODE_63449_length_177_cov_1.729167_g61295_i0 PRJNA379145 63449 177 1.729167 3.06062559 Thermoplasmatota archaeon 2806419 Archaea Archaea 60.8 5.13e-9   NR MCU0798289.1 2806419 g61295 i0 67.5 1.67796610169492 40 13 67.8 0 172 53 154 193 MCU0798289.1 ornithine carbamoyltransferase [Thermoplasmatota archaeon] diamond 297 60.8 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
29443118 29443118 PRJNA379145_P_NODE_55730_length_205_cov_4.319767_g53576_i0 PRJNA379145 55730 205 4.319767 8.85552235 Methanomassiliicoccales archaeon LGM-RCC1 3018355 Archaea Archaea 42.7 0.00229   NR WII08072.1 3018355 g53576 i0 63.6 0.482926829268293 33 12 48.3 0 15 113 24 56 WII08072.1 hypothetical protein PED39_02425 [Methanomassiliicoccales archaeon LGM-RCC1] diamond 99 42.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon LGM-RCC1
29664028 29664028 PRJNA379145_P_NODE_67110_length_167_cov_1.208955_g64956_i0 PRJNA379145 67110 167 1.208955 2.01895485 Thermoplasmata archaeon 1906666 Archaea Archaea 60.8 5.3299999999999996e-9   NR RLF42412.1 1906666 g64956 i0 59.3 3.91616766467066 54 16 97 1 165 4 203 250 RLF42412.1 MAG: ATPase [Thermoplasmata archaeon] diamond 654 60.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29870896 29870896 PRJNA379145_P_NODE_72391_length_154_cov_1.371901_g70236_i0 PRJNA379145 72391 154 1.371901 2.11272754 root 1 Root_unresolved Root_unresolved 80.1 3.81e-16   NR OIR20374.1 1889001 g70236 i0 80.4 13.9090909090909 51 10 99.4 0 153 1 9 59 OIR20374.1 MAG: malate dehydrogenase [Marine Group III euryarchaeote CG-Bathy1] diamond 2142 80.9 0.990111248454882 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Candidatus Thermoprofundales     Marine Group III euryarchaeote CG-Bathy1
30833230 30833230 PRJNA379145_P_NODE_36474_length_336_cov_1.854785_g34326_i0 PRJNA379145 36474 336 1.854785 6.2320776 Thermoplasmatales archaeon 2268204 Archaea Archaea 108 3.48e-25   NR HDM66889.1 2268204 g34326 i0 52.3 1.55357142857143 86 41 76.8 0 334 77 302 387 HDM66889.1 polyamine aminopropyltransferase [Thermoplasmatales archaeon] diamond 522 108 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
32635427 32635427 PRJNA379145_P_NODE_46920_length_252_cov_1.474886_g44767_i0 PRJNA379145 46920 252 1.474886 3.71671272 Thermoplasmatota archaeon 2806419 Archaea Archaea 40.4 0.0364   NR MBU1913701.1 2806419 g44767 i0 47.4 0.452380952380952 38 20 45.2 0 241 128 1 38 MBU1913701.1 translation initiation factor IF-5A [Thermoplasmatota archaeon] diamond 114 40.4 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32730202 32730202 PRJNA379145_P_NODE_47220_length_250_cov_1.723502_g45067_i0 PRJNA379145 47220 250 1.723502 4.308755 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 144 4.7399999999999996e-42   NR HJM77902.1 2670411 g45067 i0 82.9 1.956 82 14 98.4 0 3 248 49 130 HJM77902.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Candidatus Thalassarchaeaceae archaeon] diamond 489 144 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;