RNAquarium Metadata Server
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contig_metadata

14 rows where bioproject = "PRJNA379145" and tax_phylum = "Tardigrada"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Tardigrada · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA379145 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13154278 13154278 PRJNA379145_P_NODE_13351_length_796_cov_3.431193_g11887_i0 PRJNA379145 13351 796 3.431193 27.31229628 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 401 6.889999999999999e-107   NTclustered gi|2493405654|ref|XM_055472580.1| 2943436 g11887 i0 79.201 72.487437185929707 601 107 74 18 93 684 2087 2678 PREDICTED: Paramacrobiotus metropolitanus eukaryotic translation elongation factor 2-like (LOC129581475), mRNA blastn 57700 401 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
13154929 13154929 PRJNA379145_P_NODE_8051_length_1071_cov_5.270713_g7089_i0 PRJNA379145 8051 1071 5.270713 56.44933623 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 254 4.18e-80   NR XP_055345436.1 2943436 g7089 i0 59.9 1.82913165266106 217 85 60.8 1 54 704 3 217 XP_055345436.1 60S ribosomal protein L10a-like [Paramacrobiotus metropolitanus] diamond 1959 254 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
18252360 18252360 PRJNA379145_P_NODE_24555_length_503_cov_4.391489_g11887_i1 PRJNA379145 24555 503 4.391489 22.08918967 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 279 2.07e-70   NTclustered gi|2493405658|ref|XM_055472581.1| 2943436 g11887 i1 80.157 68.0874751491054 383 68 75 8 13 391 3283 2905 PREDICTED: Paramacrobiotus metropolitanus polycystic kidney disease 2-like 2 protein (LOC129581476), mRNA blastn 34248 279 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
22077663 22077663 PRJNA379145_P_NODE_70818_length_158_cov_0.984000_g68663_i0 PRJNA379145 70818 158 0.984 1.55472 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 134 4.53e-27   NTclustered gi|2493418936|ref|XM_055475954.1| 2943436 g68663 i0 88.288 69.4493670886076 111 13 70 0 1 111 230 120 PREDICTED: Paramacrobiotus metropolitanus histone H4 (LOC129583912), mRNA blastn 10973 134 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
23353241 23353241 PRJNA379145_P_NODE_9779_length_965_cov_8.094421_g8645_i0 PRJNA379145 9779 965 8.094421 78.11116265 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 307 1.17e-100   NR OQV15233.1 2072580 g8645 i0 66.4 10.8497409326425 220 74 68.4 0 186 845 50 269 OQV15233.1 40S ribosomal protein S2 [Hypsibius exemplaris] diamond 10470 310 0.990322580645161 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius exemplaris
26916773 26916773 PRJNA379145_P_NODE_42982_length_279_cov_1.439024_g40830_i0 PRJNA379145 42982 279 1.439024 4.01487696 Hypsibius exemplaris 2072580 Tardigrada other_Eukaryota 84 1.9e-16   NR OQV17845.1 2072580 g40830 i0 52 15.7311827956989 75 36 80.6 0 8 232 13 87 OQV17845.1 Spectrin beta chain [Hypsibius exemplaris] diamond 4389 84 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius exemplaris
27296217 27296217 PRJNA379145_P_NODE_42303_length_284_cov_2.191235_g40151_i0 PRJNA379145 42303 284 2.191235 6.2231074 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 73.2 1.21e-12   NR XP_055339889.1 2943436 g40151 i0 45.2 0.77112676056338 73 40 77.1 0 1 219 561 633 XP_055339889.1 LOW QUALITY PROTEIN: glycogen [starch] synthase, muscle-like [Paramacrobiotus metropolitanus] diamond 219 73.2 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
27391251 27391251 PRJNA379145_P_NODE_9763_length_966_cov_4.385852_g8631_i0 PRJNA379145 9763 966 4.385852 42.36733032 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 100 2.52e-20   NR GAU98225.1 947166 g8631 i0 52.9 0.782608695652174 85 40 26.4 0 831 577 182 266 GAU98225.1 hypothetical protein RvY_09401 [Ramazzottius varieornatus] diamond 756 100 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
27548856 27548856 PRJNA379145_P_NODE_6644_length_1181_cov_2.404181_g5844_i0 PRJNA379145 6644 1181 2.404181 28.39337761 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 70.1 8.54e-9   NR GAV03563.1 947166 g5844 i0 30.2 0.41151566469094 162 102 38.4 4 442 894 391 552 GAV03563.1 hypothetical protein RvY_13963-1 [Ramazzottius varieornatus] diamond 486 70.1 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
28274947 28274947 PRJNA379145_P_NODE_13746_length_780_cov_2.714859_g11530_i1 PRJNA379145 13746 780 2.714859 21.1759002 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 114 6.09e-28   NR XP_055344787.1 2943436 g11530 i1 43.3 0.811538461538462 104 58 39.6 1 465 773 7 110 XP_055344787.1 transforming growth factor beta-1-induced transcript 1 protein-like [Paramacrobiotus metropolitanus] diamond 633 114 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
28969729 28969729 PRJNA379145_P_NODE_12968_length_812_cov_2.700899_g11530_i0 PRJNA379145 12968 812 2.700899 21.93129988 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 114 8.07e-28   NR XP_055344787.1 2943436 g11530 i0 43.3 0.779556650246305 104 58 38.1 1 316 8 7 110 XP_055344787.1 transforming growth factor beta-1-induced transcript 1 protein-like [Paramacrobiotus metropolitanus] diamond 633 114 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
29001690 29001690 PRJNA379145_P_NODE_28508_length_438_cov_2.562963_g26415_i0 PRJNA379145 28508 438 2.562963 11.22577794 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 123 7.22e-32   NR XP_055338391.1 2943436 g26415 i0 49.3 0.917808219178082 134 59 91.1 3 35 433 96 221 XP_055338391.1 zinc D-Ala-D-Ala carboxypeptidase-like [Paramacrobiotus metropolitanus] diamond 402 123 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
29600972 29600972 PRJNA379145_P_NODE_62310_length_181_cov_1.439189_g60156_i0 PRJNA379145 62310 181 1.439189 2.60493209 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 116 7.95e-29   NR XP_055345434.1 2943436 g60156 i0 90 7.92265193370166 60 6 99.4 0 1 180 116 175 XP_055345434.1 fumarate hydratase, mitochondrial-like [Paramacrobiotus metropolitanus] diamond 1434 116 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
32635357 32635357 PRJNA379145_P_NODE_11680_length_868_cov_4.548503_g8631_i1 PRJNA379145 11680 868 4.548503 39.48100604 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 100 1.32e-20   NR GAU98225.1 947166 g8631 i1 52.9 0.870967741935484 85 40 29.4 0 733 479 182 266 GAU98225.1 hypothetical protein RvY_09401 [Ramazzottius varieornatus] diamond 756 100 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;