RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA379145" and tax_phylum = "Orthonectida"

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tax_superkingdom 1

tax_phylum 1

  • Orthonectida · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA379145 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27944903 27944903 PRJNA379145_P_NODE_62565_length_180_cov_1.564626_g60411_i0 PRJNA379145 62565 180 1.564626 2.8163268 Opisthokonta 33154 Orthonectida other_Eukaryota 54.7 9.52e-7   NR OAF71340.1 1819745 g60411 i0 66.7 1.56666666666667 39 13 65 0 3 119 226 264 OAF71340.1 hypothetical protein A3Q56_00919 [Intoshia linei] diamond 282 54.7 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
29348767 29348767 PRJNA379145_P_NODE_8169_length_1064_cov_2.193986_g7197_i0 PRJNA379145 8169 1064 2.193986 23.34401104 Intoshia linei 1819745 Orthonectida other_Eukaryota 61.6 2.62e-6   NR OAF69827.1 1819745 g7197 i0 22.8 1.3703007518797 237 140 60.3 8 39 680 104 320 OAF69827.1 hypothetical protein A3Q56_02422 [Intoshia linei] diamond 1458 61.6 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
29569568 29569568 PRJNA379145_P_NODE_50290_length_232_cov_1.532663_g48136_i0 PRJNA379145 50290 232 1.532663 3.55577816 Intoshia linei 1819745 Orthonectida other_Eukaryota 74.7 1.82e-13   NR OAF72148.1 1819745 g48136 i0 68.9 0.581896551724138 45 14 58.2 0 232 98 2335 2379 OAF72148.1 hypothetical protein A3Q56_00089 [Intoshia linei] diamond 135 74.7 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
31497212 31497212 PRJNA379145_P_NODE_40576_length_298_cov_2.090566_g38425_i0 PRJNA379145 40576 298 2.090566 6.22988668 Intoshia linei 1819745 Orthonectida other_Eukaryota 46.2 0.00205   NR OAF65043.1 1819745 g38425 i0 38 0.714765100671141 71 41 69.5 2 244 38 26 95 OAF65043.1 hypothetical protein A3Q56_07246, partial [Intoshia linei] diamond 213 46.2 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;