RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where bioproject = "PRJNA379145" and tax_phylum = "Nanobdellota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA379145 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27106368 27106368 PRJNA379145_P_NODE_22222_length_547_cov_3.110895_g20271_i0 PRJNA379145 22222 547 3.110895 17.01659565 Nanobdellota archaeon 2026764 Archaea Archaea 68.9 3.29e-11   NR MBU2562356.1 2026764 g20271 i0 34.5 1.31627056672761 116 70 63.6 3 17 364 2 111 MBU2562356.1 SET domain-containing protein [Nanoarchaeota archaeon] diamond 720 68.9 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
27201169 27201169 PRJNA379145_P_NODE_37682_length_324_cov_2.281787_g35531_i0 PRJNA379145 37682 324 2.281787 7.39298988 Nanobdellota archaeon 2026764 Archaea Archaea 129 5.13e-32   NR MCA9485224.1 2026764 g35531 i0 52.3 0.990740740740741 107 51 99.1 0 322 2 187 293 MCA9485224.1 GTP-binding protein [Nanoarchaeota archaeon] diamond 321 129 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
27832943 27832943 PRJNA379145_P_NODE_15504_length_718_cov_5.214599_g13862_i0 PRJNA379145 15504 718 5.214599 37.44082082 Nanobdellota archaeon 2026764 Archaea Archaea 187 1.2e-55   NR MBU0470866.1 2026764 g13862 i0 45.2 0.877437325905292 210 104 84 3 655 53 2 209 MBU0470866.1 hypothetical protein [Nanoarchaeota archaeon] diamond 630 187 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28180168 28180168 PRJNA379145_P_NODE_4226_length_1435_cov_61.714693_g3694_i0 PRJNA379145 4226 1435 61.714693 885.60584455 Nanobdellota archaeon 2026764 Archaea Archaea 62.4 2.46e-6   NR MCA9495696.1 2026764 g3694 i0 27 0.712891986062718 341 197 61.7 16 1318 434 26 360 MCA9495696.1 hypothetical protein [Nanoarchaeota archaeon] diamond 1023 62.4 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
30928156 30928156 PRJNA379145_P_NODE_41954_length_287_cov_1.838583_g39802_i0 PRJNA379145 41954 287 1.838583 5.27673321 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 67.8 7.83e-11   NR HLD98439.1 2910166 g39802 i0 43.8 0.763066202090592 73 41 76.3 0 263 45 244 316 HLD98439.1 FAD-dependent oxidoreductase [Candidatus Nanoarchaeia archaeon] diamond 219 67.8 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;