RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA379145", tax_phylum = "Minisyncoccota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 5 ✖

tax_phylum 1

  • Minisyncoccota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA379145 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28085603 28085603 PRJNA379145_P_NODE_62405_length_180_cov_2.904762_g60251_i0 PRJNA379145 62405 180 2.904762 5.2285716 Candidatus Spechtbacterales bacterium 3085100 Bacteria Bacteria 51.6 7.54e-6   NR MEX2144977.1 3085100 g60251 i0 33.3 1.05 63 34 95 2 180 10 146 206 MEX2144977.1 hypothetical protein [Candidatus Spechtbacterales bacterium] diamond 189 51.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota   Candidatus Spechtbacterales     Candidatus Spechtbacterales bacterium
30345314 30345314 PRJNA379145_P_NODE_32592_length_381_cov_1.979885_g30456_i0 PRJNA379145 32592 381 1.979885 7.54336185 root 1 Root_unresolved Root_unresolved 48.9 0.00105   NR HWA32101.1 2053589 g30456 i0 44.8 4.20472440944882 58 29 43.3 1 313 149 2 59 HWA32101.1 molecular chaperone DnaJ [Candidatus Paceibacterota bacterium] diamond 1602 49.3 0.991886409736308 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31370764 31370764 PRJNA379145_P_NODE_39576_length_307_cov_1.383212_g37425_i0 PRJNA379145 39576 307 1.383212 4.24646084 Minisyncoccota bacterium 2053589 Bacteria Bacteria 63.9 2.17e-9   NR MEZ0209065.1 2053589 g37425 i0 49.4 0.830618892508143 85 36 83.1 4 17 271 233 310 MEZ0209065.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 255 63.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31433710 31433710 PRJNA379145_P_NODE_36176_length_339_cov_1.862745_g34028_i0 PRJNA379145 36176 339 1.862745 6.31470555 Minisyncoccota bacterium 2053589 Bacteria Bacteria 65.1 1.65e-9   NR MDD3386752.1 2053589 g34028 i0 33.7 0.893805309734513 101 64 89.4 1 10 312 60 157 MDD3386752.1 molecular chaperone DnaK [Candidatus Paceibacterota bacterium] diamond 303 65.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32319909 32319909 PRJNA379145_P_NODE_16299_length_693_cov_1.865152_g14613_i0 PRJNA379145 16299 693 1.865152 12.92550336 Minisyncoccota bacterium 2053589 Bacteria Bacteria 78.6 1.32e-13   NR HEX7724642.1 2053589 g14613 i0 32.5 3.11688311688312 163 99 67.5 5 531 64 50 208 HEX7724642.1 SDR family NAD(P)-dependent oxidoreductase [Candidatus Paceibacterota bacterium] diamond 2160 78.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;