contig_metadata
12 rows where bioproject = "PRJNA379145" and tax_phylum = "Kitrinoviricota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2349358 | 2349358 | PRJNA379145_P_NODE_51162_length_227_cov_1.716495_g49008_i0 | PRJNA379145 | 51162 | 227 | 1.716495 | 3.89644365 | Potexvirus | 12176 | Viruses | Viruses | 418 | 1.7299999999999996e-112 | NTclustered | gi|1839430140|gb|MK860513.1| | 112229 | g49008 | i0 | 100 | 99.5594713656388 | 226 | 0 | 99 | 0 | 1 | 226 | 739 | 964 | Pepino mosaic virus isolate MU14_4.19a_Mo TGB1 protein, TGB2 protein, TGB3 protein, and CP protein genes, complete cds | blastn | 22600 | 418 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Alphaflexiviridae | Potexvirus | Potexvirus pepini | ||
| 2951321 | 2951321 | PRJNA379145_P_NODE_23343_length_526_cov_1.933063_g21360_i0 | PRJNA379145 | 23343 | 526 | 1.933063 | 10.16791138 | Martellivirales sp. | 2809552 | Viruses | Viruses | 54.7 | 0.014 | NTclustered | gi|2647548574|gb|OR843378.1| | 2809552 | g21360 | i0 | 100 | 0.0551330798479087 | 29 | 0 | 6 | 0 | 245 | 273 | 12322 | 12294 | Martellivirales sp. strain MR233-17E/76 polyprotein gene, partial cds | blastn | 29 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Martellivirales sp. | ||||
| 6177009 | 6177009 | PRJNA379145_P_NODE_63625_length_177_cov_1.006944_g61471_i0 | PRJNA379145 | 63625 | 177 | 1.006944 | 1.78229088 | Potexvirus | 12176 | Viruses | Viruses | 311 | 2.23e-80 | NTclustered | gi|1805119874|gb|MN038406.1| | 112229 | g61471 | i0 | 98.305 | 93.9604519774011 | 177 | 3 | 100 | 0 | 1 | 177 | 2374 | 2198 | Pepino mosaic virus strain MZ3, complete genome | blastn | 16631 | 311 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Alphaflexiviridae | Potexvirus | Potexvirus pepini | ||
| 13154683 | 13154683 | PRJNA379145_P_NODE_45811_length_259_cov_1.420354_g43658_i0 | PRJNA379145 | 45811 | 259 | 1.420354 | 3.67871686 | Potexvirus pepini | 3433856 | Viruses | Viruses | 468 | 1.98e-127 | NTclustered | gi|148283741|gb|EF408821.3| | 112229 | g43658 | i0 | 99.228 | 96.030888030888 | 259 | 2 | 100 | 0 | 1 | 259 | 19 | 277 | Pepino mosaic virus isolate PepMV-PK, complete genome | blastn | 24872 | 468 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Alphaflexiviridae | Potexvirus | Potexvirus pepini | ||
| 15703846 | 15703846 | PRJNA379145_P_NODE_67953_length_165_cov_1.037879_g65799_i0 | PRJNA379145 | 67953 | 165 | 1.037879 | 1.71250035 | Tobamovirus tabaci | 3432891 | Viruses | Viruses | 294 | 2.08e-75 | NTclustered | gi|2813525801|dbj|LC846392.1| | 12242 | g65799 | i0 | 98.788 | 100.012121212121 | 165 | 2 | 100 | 0 | 1 | 165 | 3948 | 3784 | Tobacco mosaic virus TMV-Du-CNU1 genomic RNA, complete genome | blastn | 16502 | 294 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Virgaviridae | Tobamovirus | Tobamovirus tabaci | ||
| 19526992 | 19526992 | PRJNA379145_P_NODE_67916_length_165_cov_1.136364_g65762_i0 | PRJNA379145 | 67916 | 165 | 1.136364 | 1.8750006 | Tobamovirus tabaci | 3432891 | Viruses | Viruses | 300 | 4.46e-77 | NTclustered | gi|388240225|emb|HE818435.1| | 12242 | g65762 | i0 | 99.394 | 99.9333333333333 | 165 | 1 | 100 | 0 | 1 | 165 | 4278 | 4442 | Tobacco mosaic virus isolate Ludian, complete genome | blastn | 16489 | 300 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Virgaviridae | Tobamovirus | Tobamovirus tabaci | ||
| 20802393 | 20802393 | PRJNA379145_P_NODE_47037_length_251_cov_1.866972_g44884_i0 | PRJNA379145 | 47037 | 251 | 1.866972 | 4.68609972 | Ripothoz virus | 3131336 | Viruses | Viruses | 130 | 1.02e-25 | NTclustered | gi|2717322249|gb|PP173638.1| | 3131336 | g44884 | i0 | 96.25 | 1.51792828685259 | 80 | 2 | 31 | 1 | 19 | 97 | 5631 | 5552 | MAG: Ripothoz virus isolate MP3_k141_314104 genomic sequence | blastn | 381 | 130 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Magsaviricetes | Nodamuvirales | Ripothoz virus | ||||
| 27643789 | 27643789 | PRJNA379145_P_NODE_13924_length_774_cov_1.794872_g12409_i0 | PRJNA379145 | 13924 | 774 | 1.794872 | 13.89230928 | Erysiphe necator associated flexivirus 3 | 2743100 | Viruses | Viruses | 208 | 2.34e-57 | NR | QKN22675.1 | 2743100 | g12409 | i0 | 52.7 | 2.18992248062015 | 203 | 91 | 77.5 | 3 | 774 | 175 | 564 | 764 | QKN22675.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 3] | diamond | 1695 | 208 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Erysiphe necator associated flexivirus 3 | ||||
| 28148900 | 28148900 | PRJNA379145_P_NODE_18105_length_642_cov_1.880131_g16327_i0 | PRJNA379145 | 18105 | 642 | 1.880131 | 12.07044102 | Erysiphe necator associated flexivirus 2 | 2743099 | Viruses | Viruses | 164 | 9.23e-43 | NR | QKN22646.1 | 2743099 | g16327 | i0 | 72 | 1.14485981308411 | 118 | 33 | 55.1 | 0 | 288 | 641 | 1157 | 1274 | QKN22646.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 2] | diamond | 735 | 164 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Erysiphe necator associated flexivirus 2 | ||||
| 28401414 | 28401414 | PRJNA379145_P_NODE_48446_length_242_cov_2.066986_g46292_i0 | PRJNA379145 | 48446 | 242 | 2.066986 | 5.00210612 | Fusarium deltaflexivirus 2 | 2973081 | Viruses | Viruses | 114 | 2.4199999999999998e-27 | NR | BDQ13824.1 | 2973081 | g46292 | i0 | 66.3 | 0.991735537190083 | 80 | 27 | 99.2 | 0 | 240 | 1 | 364 | 443 | BDQ13824.1 unnamed protein product [Fusarium deltaflexivirus 2] | diamond | 240 | 114 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Deltaflexiviridae | Fusarium deltaflexivirus 2 | |||
| 30580277 | 30580277 | PRJNA379145_P_NODE_613_length_2772_cov_4.202994_g506_i0 | PRJNA379145 | 613 | 2772 | 4.202994 | 116.50699368 | Sclerotinia sclerotiorum deltaflexivirus 1 | 1788309 | Viruses | Viruses | 86.7 | 4.12e-15 | NR | YP_009508364.1 | 1788309 | g506 | i0 | 38.3 | 0.143939393939394 | 133 | 80 | 14.4 | 2 | 1031 | 633 | 67 | 197 | YP_009508364.1 hypothetical protein [Sclerotinia sclerotiorum deltaflexivirus 1] | diamond | 399 | 86.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Deltaflexiviridae | Deltaflexivirus | Deltaflexivirus sclerotiniae | ||
| 31939783 | 31939783 | PRJNA379145_P_NODE_43617_length_274_cov_1.601660_g41465_i0 | PRJNA379145 | 43617 | 274 | 1.60166 | 4.3885484 | Pestalotiopsis deltaflexivirus 1 | 2816841 | Viruses | Viruses | 128 | 3.88e-32 | NR | QTH80200.1 | 2816841 | g41465 | i0 | 58.9 | 1.98175182481752 | 90 | 37 | 98.5 | 0 | 1 | 270 | 440 | 529 | QTH80200.1 MAG: RNA-dependent RNA polymerase [Pestalotiopsis deltaflexivirus 1] | diamond | 543 | 128 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Deltaflexiviridae | Pestalotiopsis deltaflexivirus 1 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;