RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA379145" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA379145 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24626943 24626943 PRJNA379145_P_NODE_23200_length_528_cov_13.923232_g21220_i0 PRJNA379145 23200 528 13.923232 73.51466496 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 188 6.47e-58   NR MFC1734511.1 2030809 g21220 i0 63.1 4.82954545454545 141 51 80.1 1 512 90 17 156 MFC1734511.1 arsenate reductase ArsC [Candidatus Hydrogenedentota bacterium] diamond 2550 188 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
27485785 27485785 PRJNA379145_P_NODE_4463_length_1404_cov_3.167761_g3907_i0 PRJNA379145 4463 1404 3.167761 44.47536444 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 340 9.1e-109   NR NUM56236.1 2030809 g3907 i0 42.7 2.88675213675214 450 240 95.7 8 60 1403 35 468 NUM56236.1 flavin monoamine oxidase family protein [Candidatus Hydrogenedentota bacterium] diamond 4053 340 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29064609 29064609 PRJNA379145_P_NODE_5148_length_1323_cov_2.498450_g4523_i0 PRJNA379145 5148 1323 2.49845 33.0544935 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 237 7.4e-67   NR MBN2310942.1 2030809 g4523 i0 41.4 1.33786848072562 295 164 66.7 4 1259 378 225 511 MBN2310942.1 right-handed parallel beta-helix repeat-containing protein [Candidatus Hydrogenedentota bacterium] diamond 1770 237 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32224823 32224823 PRJNA379145_P_NODE_73438_length_152_cov_1.058824_g71283_i0 PRJNA379145 73438 152 1.058824 1.60941248 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 68.6 8.35e-12   NR HOZ45348.1 2030809 g71283 i0 58.7 1.83552631578947 46 19 90.8 0 6 143 262 307 HOZ45348.1 FAD-dependent oxidoreductase [Candidatus Hydrogenedentota bacterium] diamond 279 68.6 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;