RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA379145" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA379145 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28211713 28211713 PRJNA379145_P_NODE_29866_length_418_cov_2.353247_g27751_i0 PRJNA379145 29866 418 2.353247 9.83657246 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 106 5.69e-26   NR PID83886.1 2044595 g27751 i0 44.9 3.89712918660287 136 69 95.5 3 1 399 46 178 PID83886.1 MAG: hypothetical protein CSB09_03835 [Candidatus Altimarinota bacterium] diamond 1629 106 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32034844 32034844 PRJNA379145_P_NODE_39238_length_310_cov_1.382671_g37087_i0 PRJNA379145 39238 310 1.382671 4.2862801 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 45.8 0.0068   NR MCK9186358.1 2044595 g37087 i0 40.7 0.570967741935484 59 32 57.1 1 133 309 429 484 MCK9186358.1 cadmium-translocating P-type ATPase [Candidatus Altimarinota bacterium] diamond 177 45.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;