RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA379145", tax_kingdom = "Thermoproteati" and tax_phylum = "Candidatus Bathyarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Bathyarchaeota · 6 ✖

tax_kingdom 1

  • Thermoproteati · 6 ✖

bioproject 1

  • PRJNA379145 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26821972 26821972 PRJNA379145_P_NODE_5741_length_1263_cov_2.885366_g4961_i1 PRJNA379145 5741 1263 2.885366 36.44217258 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 254 4.12e-77   NR HDO80756.1 2026714 g4961 i1 41.4 2.67695961995249 374 198 85.3 8 1077 1 8 375 HDO80756.1 actin, cytoplasmic 2 [Candidatus Bathyarchaeota archaeon] diamond 3381 254 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
28432999 28432999 PRJNA379145_P_NODE_22046_length_551_cov_1.401544_g20104_i0 PRJNA379145 22046 551 1.401544 7.72250744 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 88.2 7.78e-19   NR RLI17338.1 2026714 g20104 i0 48.1 0.566243194192377 104 54 56.6 0 331 20 19 122 RLI17338.1 MAG: zinc transporter ZupT, partial [Candidatus Bathyarchaeota archaeon] diamond 312 88.2 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
29317061 29317061 PRJNA379145_P_NODE_56649_length_202_cov_1.461538_g54495_i0 PRJNA379145 56649 202 1.461538 2.95230676 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 49.3 9.4e-5   NR HEY5620876.1 3045160 g54495 i0 41 1.72277227722772 61 36 90.6 0 183 1 179 239 HEY5620876.1 translation initiation factor IF-2 subunit alpha [Candidatus Bathyarchaeia archaeon] diamond 348 49.3 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
31054765 31054765 PRJNA379145_P_NODE_9875_length_959_cov_14.978402_g8735_i0 PRJNA379145 9875 959 14.978402 143.64287518 Candidatus Bathyarchaeum tardum 3042151 Archaea Archaea 174 5.35e-49   NR WGM89485.1 3042151 g8735 i0 38.6 2.3274244004171 251 149 77.9 4 851 105 12 259 WGM89485.1 MAG: tryptophan-rich sensory protein [Candidatus Bathyarchaeum tardum] diamond 2232 174 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia Candidatus Bathyarchaeales Candidatus Bathyarchaeaceae Candidatus Bathyarchaeum Candidatus Bathyarchaeum tardum
31211900 31211900 PRJNA379145_P_NODE_11695_length_867_cov_73.645084_g10371_i0 PRJNA379145 11695 867 73.645084 638.50287828 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 48.9 0.00466   NR MBD3187111.1 2026714 g10371 i0 23.3 0.622837370242215 180 110 58.8 6 118 627 8 169 MBD3187111.1 GTP-binding protein [Candidatus Bathyarchaeota archaeon] diamond 540 48.9 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
32730238 32730238 PRJNA379145_P_NODE_68520_length_163_cov_1.661538_g66366_i0 PRJNA379145 68520 163 1.661538 2.70830694 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 43.9 0.00458   NR HZY93911.1 3045160 g66366 i0 40.4 1.84049079754601 47 28 86.5 0 161 21 212 258 HZY93911.1 translation initiation factor IF-2 subunit alpha [Candidatus Bathyarchaeia archaeon] diamond 300 43.9 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;