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contig_metadata

35 rows where bioproject = "PRJNA379145" and tax_kingdom = "Methanobacteriati"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 35 ✖

bioproject 1

  • PRJNA379145 · 35 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19526559 19526559 PRJNA379145_P_NODE_25136_length_493_cov_2.389130_g23106_i0 PRJNA379145 25136 493 2.38913 11.7784109 Methanobrevibacter sp. TLL-48-HuF1 2870563 Archaea Archaea 52.8 0.048   NTclustered gi|2246976648|gb|CP081485.1| 2870563 g23106 i0 100 0.0567951318458418 28 0 6 0 198 225 1352682 1352709 Methanobrevibacter sp. TLL-48-HuF1 chromosome, complete genome blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. TLL-48-HuF1
26758376 26758376 PRJNA379145_P_NODE_8121_length_1067_cov_8.368472_g7152_i0 PRJNA379145 8121 1067 8.368472 89.29159624 Thermoplasmatales archaeon 2268204 Archaea Archaea 58.5 1.65e-6   NR MFP3299986.1 2268204 g7152 i0 31.3 0.323336457357076 115 67 29 3 343 35 3 117 MFP3299986.1 single-stranded DNA-binding protein [Thermoplasmatales archaeon] diamond 345 58.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
26790236 26790236 PRJNA379145_P_NODE_46521_length_254_cov_1.945701_g44368_i0 PRJNA379145 46521 254 1.945701 4.94208054 Methanosarcinales archaeon 2250255 Archaea Archaea 74.3 3.16e-13   NR RYE85578.1 2250255 g44368 i0 48.3 1.02755905511811 87 39 99.2 4 253 2 437 520 RYE85578.1 MAG: hypothetical protein EOO65_00010 [Methanosarcinales archaeon] diamond 261 74.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
26790239 26790239 PRJNA379145_P_NODE_47481_length_248_cov_2.423256_g45328_i0 PRJNA379145 47481 248 2.423256 6.00967488 Methanobacteriota archaeon 2026739 Archaea Archaea 56.6 4.85e-7   NR MBT3441953.1 2026739 g45328 i0 49.2 3.64112903225806 61 30 73.8 1 199 17 154 213 MBT3441953.1 hypothetical protein [Methanobacteriota archaeon] diamond 903 56.6 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27281783 27281783 PRJNA379145_P_NODE_6443_length_1198_cov_3.606009_g5660_i0 PRJNA379145 6443 1198 3.606009 43.19998782 root 1 Root_unresolved Root_unresolved 105 3.91e-20   NR MDO8728066.1 2032688 g5660 i0 34.5 2.36143572621035 171 99 42.3 4 1155 649 591 750 MDO8728066.1 DUF4062 domain-containing protein [Candidatus Methanoperedens sp.] diamond 2829 105 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
27580427 27580427 PRJNA379145_P_NODE_46544_length_254_cov_1.737557_g44391_i0 PRJNA379145 46544 254 1.737557 4.41339478 Methanosarcinales archaeon 2250255 Archaea Archaea 74.3 3.16e-13   NR RYE85578.1 2250255 g44391 i0 48.3 1.02755905511811 87 39 99.2 4 253 2 437 520 RYE85578.1 MAG: hypothetical protein EOO65_00010 [Methanosarcinales archaeon] diamond 261 74.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
27675501 27675501 PRJNA379145_P_NODE_744_length_2628_cov_8.958382_g623_i0 PRJNA379145 744 2628 8.958382 235.42627896 Methanobacteriota archaeon 2026739 Archaea Archaea 156 1.49e-35   NR MBT5736879.1 2026739 g623 i0 36.9 1.72602739726027 295 165 33 9 988 122 42 321 MBT5736879.1 hypothetical protein [Methanobacteriota archaeon] diamond 4536 156 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27738673 27738673 PRJNA379145_P_NODE_29404_length_425_cov_1.923469_g27297_i0 PRJNA379145 29404 425 1.923469 8.17474325 Methanomicrobia archaeon 2268195 Archaea Archaea 49.3 7.85e-4   NR HHN81723.1 2268195 g27297 i0 25.8 0.875294117647059 124 81 86.1 4 422 57 103 217 HHN81723.1 hypothetical protein [Methanomicrobia archaeon] diamond 372 49.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia       Methanomicrobia archaeon
27770178 27770178 PRJNA379145_P_NODE_60984_length_185_cov_2.013158_g58830_i0 PRJNA379145 60984 185 2.013158 3.7243423 Halobacteriales archaeon QS_4_62_28 1919173 Archaea Archaea 43.5 0.00375   NR PSP94159.1 1919173 g58830 i0 35.7 0.908108108108108 56 34 90.8 1 170 3 62 115 PSP94159.1 MAG: histidine kinase [Halobacteriales archaeon QS_4_62_28] diamond 168 43.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon QS_4_62_28
27818760 27818760 PRJNA379145_P_NODE_61004_length_185_cov_1.907895_g58850_i0 PRJNA379145 61004 185 1.907895 3.52960575 root 1 Root_unresolved Root_unresolved 43.1 0.0129   NR WP_019268622.1 2173 g58850 i0 41.5 6.85945945945946 53 29 82.7 1 22 174 673 725 WP_019268622.1 beta strand repeat-containing protein [Methanobrevibacter smithii] diamond 1269 43.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
27864550 27864550 PRJNA379145_P_NODE_61805_length_182_cov_2.523490_g59651_i0 PRJNA379145 61805 182 2.52349 4.5927518 Methanosarcinales archaeon 2250255 Archaea Archaea 71.2 1.44e-12   NR RYE85578.1 2250255 g59651 i0 51.7 0.956043956043956 58 28 95.6 0 175 2 272 329 RYE85578.1 MAG: hypothetical protein EOO65_00010 [Methanosarcinales archaeon] diamond 174 71.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
27944895 27944895 PRJNA379145_P_NODE_46625_length_253_cov_3.118182_g44472_i0 PRJNA379145 46625 253 3.118182 7.88900046 Methanobacteriati 3366610 Archaea Archaea 46.6 1.72e-4   NR MAT49347.1 2026739 g44472 i0 56.1 0.972332015810277 41 17 47.4 1 122 3 13 53 MAT49347.1 hypothetical protein [Methanobacteriota archaeon] diamond 246 47 0.991489361702128 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28008164 28008164 PRJNA379145_P_NODE_30925_length_403_cov_2.754054_g28798_i0 PRJNA379145 30925 403 2.754054 11.09883762 root 1 Root_unresolved Root_unresolved 53.5 3.27e-5   NR HTT15768.1 1906666 g28798 i0 36 2.67990074441687 89 55 65.5 2 269 6 135 222 HTT15768.1 FG-GAP repeat protein [Thermoplasmata archaeon] diamond 1080 53.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28022697 28022697 PRJNA379145_P_NODE_65965_length_170_cov_1.218978_g63811_i0 PRJNA379145 65965 170 1.218978 2.0722626 Thermoplasmata archaeon 1906666 Archaea Archaea 83.6 4.35e-17   NR MFO7990738.1 1906666 g63811 i0 67.9 7.46470588235294 53 17 93.5 0 1 159 74 126 MFO7990738.1 peptide-methionine (R)-S-oxide reductase MsrB [Thermoplasmata archaeon] diamond 1269 83.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28418669 28418669 PRJNA379145_P_NODE_18886_length_623_cov_2.333898_g17063_i0 PRJNA379145 18886 623 2.333898 14.54018454 root 1 Root_unresolved Root_unresolved 63.2 9.57e-8   NR HTT15768.1 1906666 g17063 i0 33.6 1.30497592295345 143 79 63.6 5 399 4 137 274 HTT15768.1 FG-GAP repeat protein [Thermoplasmata archaeon] diamond 813 63.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28607889 28607889 PRJNA379145_P_NODE_41827_length_288_cov_1.674510_g39675_i0 PRJNA379145 41827 288 1.67451 4.8225888 root 1 Root_unresolved Root_unresolved 44.3 0.0188   NR WP_292797136.1 66852 g39675 i0 32.5 5.33333333333333 77 38 80.2 2 10 240 90 152 WP_292797136.1 hypothetical protein [Methanobrevibacter sp.] diamond 1536 44.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
28780190 28780190 PRJNA379145_P_NODE_71887_length_155_cov_1.516393_g69732_i0 PRJNA379145 71887 155 1.516393 2.35040915 Methanofollis fontis 2052832 Archaea Archaea 42.4 0.0155   NR WP_235855636.1 2052832 g69732 i0 41.5 2.05161290322581 53 27 94.8 1 150 4 518 570 WP_235855636.1 chloride channel protein [Methanofollis fontis] diamond 318 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanofollis Methanofollis fontis
28906404 28906404 PRJNA379145_P_NODE_55668_length_206_cov_1.416185_g53514_i0 PRJNA379145 55668 206 1.416185 2.9173411 Halalkalicoccus sp. 1973143 Archaea Archaea 40.8 0.0353   NR MCL7417192.1 1973143 g53514 i0 35.3 0.742718446601942 51 32 74.3 1 37 189 1 50 MCL7417192.1 gamma carbonic anhydrase family protein [Halalkalicoccus sp.] diamond 153 40.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp.
28969795 28969795 PRJNA379145_P_NODE_47808_length_246_cov_2.276995_g45655_i0 PRJNA379145 47808 246 2.276995 5.6014077 Methanobacterium ferruginis 710191 Archaea Archaea 63.5 1.75e-9   NR WP_286242525.1 710191 g45655 i0 50 0.804878048780488 66 33 80.5 0 48 245 268 333 WP_286242525.1 phenylalanine--tRNA ligase subunit beta [Methanobacterium ferruginis] diamond 198 63.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium ferruginis
29127869 29127869 PRJNA379145_P_NODE_63449_length_177_cov_1.729167_g61295_i0 PRJNA379145 63449 177 1.729167 3.06062559 Thermoplasmatota archaeon 2806419 Archaea Archaea 60.8 5.13e-9   NR MCU0798289.1 2806419 g61295 i0 67.5 1.67796610169492 40 13 67.8 0 172 53 154 193 MCU0798289.1 ornithine carbamoyltransferase [Thermoplasmatota archaeon] diamond 297 60.8 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
29443118 29443118 PRJNA379145_P_NODE_55730_length_205_cov_4.319767_g53576_i0 PRJNA379145 55730 205 4.319767 8.85552235 Methanomassiliicoccales archaeon LGM-RCC1 3018355 Archaea Archaea 42.7 0.00229   NR WII08072.1 3018355 g53576 i0 63.6 0.482926829268293 33 12 48.3 0 15 113 24 56 WII08072.1 hypothetical protein PED39_02425 [Methanomassiliicoccales archaeon LGM-RCC1] diamond 99 42.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon LGM-RCC1
29460084 29460084 PRJNA379145_P_NODE_43330_length_276_cov_1.925926_g41178_i0 PRJNA379145 43330 276 1.925926 5.31555576 root 1 Root_unresolved Root_unresolved 52.4 2.1e-5   NR WP_237705108.1 54076 g41178 i0 54.8 1.39130434782609 42 19 45.7 0 149 274 16 57 WP_237705108.1 glycosyltransferase [Thermococcus zilligii] diamond 384 52.8 0.992424242424242 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus zilligii
29664028 29664028 PRJNA379145_P_NODE_67110_length_167_cov_1.208955_g64956_i0 PRJNA379145 67110 167 1.208955 2.01895485 Thermoplasmata archaeon 1906666 Archaea Archaea 60.8 5.3299999999999996e-9   NR RLF42412.1 1906666 g64956 i0 59.3 3.91616766467066 54 16 97 1 165 4 203 250 RLF42412.1 MAG: ATPase [Thermoplasmata archaeon] diamond 654 60.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29744325 29744325 PRJNA379145_P_NODE_5830_length_1255_cov_3.059738_g5119_i0 PRJNA379145 5830 1255 3.059738 38.3997119 root 1 Root_unresolved Root_unresolved 50.1 0.0245   NR MBE6503458.1 66852 g5119 i0 26.1 0.874900398406374 211 129 46.6 9 135 719 1143 1342 MBE6503458.1 hypothetical protein [Methanobrevibacter sp.] diamond 1098 50.4 0.994047619047619 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29870896 29870896 PRJNA379145_P_NODE_72391_length_154_cov_1.371901_g70236_i0 PRJNA379145 72391 154 1.371901 2.11272754 root 1 Root_unresolved Root_unresolved 80.1 3.81e-16   NR OIR20374.1 1889001 g70236 i0 80.4 13.9090909090909 51 10 99.4 0 153 1 9 59 OIR20374.1 MAG: malate dehydrogenase [Marine Group III euryarchaeote CG-Bathy1] diamond 2142 80.9 0.990111248454882 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Candidatus Thermoprofundales     Marine Group III euryarchaeote CG-Bathy1
29902580 29902580 PRJNA379145_P_NODE_51171_length_227_cov_1.664948_g49017_i0 PRJNA379145 51171 227 1.664948 3.77943196 Methanobacteriaceae 2159 Archaea Archaea 43.5 0.0168   NR WP_410319841.1 66852 g49017 i0 40.8 6.38325991189427 71 31 93.8 3 12 224 46 105 WP_410319841.1 Ig-like domain repeat protein [Methanobrevibacter sp.] diamond 1449 43.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29917170 29917170 PRJNA379145_P_NODE_42191_length_285_cov_2.067460_g40039_i0 PRJNA379145 42191 285 2.06746 5.892261 Halobiforma nitratireducens 130048 Archaea Archaea 64.7 1.16e-9   NR WP_006671657.1 130048 g40039 i0 43.4 2.42105263157895 76 36 80 1 281 54 646 714 WP_006671657.1 heavy metal translocating P-type ATPase [Halobiforma nitratireducens] diamond 690 64.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halobiforma Halobiforma nitratireducens
30328214 30328214 PRJNA379145_P_NODE_32812_length_378_cov_1.988406_g30671_i0 PRJNA379145 32812 378 1.988406 7.51617468 Methanobacteriota archaeon 2026739 Archaea Archaea 123 8.739999999999998e-30   NR MBU38768.1 2026739 g30671 i0 50.4 0.992063492063492 125 60 99.2 1 3 377 2299 2421 MBU38768.1 hypothetical protein [Methanobacteriota archaeon] diamond 375 123 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
30833230 30833230 PRJNA379145_P_NODE_36474_length_336_cov_1.854785_g34326_i0 PRJNA379145 36474 336 1.854785 6.2320776 Thermoplasmatales archaeon 2268204 Archaea Archaea 108 3.48e-25   NR HDM66889.1 2268204 g34326 i0 52.3 1.55357142857143 86 41 76.8 0 334 77 302 387 HDM66889.1 polyamine aminopropyltransferase [Thermoplasmatales archaeon] diamond 522 108 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
31040136 31040136 PRJNA379145_P_NODE_22415_length_543_cov_2.084314_g20463_i0 PRJNA379145 22415 543 2.084314 11.31782502 Methanobrevibacter 2172 Archaea Archaea 95.9 1.08e-19   NR WP_004035816.1 2173 g20463 i0 34 7.0828729281768 162 94 84 5 18 473 226 384 WP_004035816.1 tRNA (guanine(10)-N(2))-dimethyltransferase [Methanobrevibacter smithii] diamond 3846 96.3 0.995846313603323 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
31925294 31925294 PRJNA379145_P_NODE_6377_length_1204_cov_3.835184_g5602_i0 PRJNA379145 6377 1204 3.835184 46.17561536 root 1 Root_unresolved Root_unresolved 277 4.1e-85   NR OGS40598.1 1797976 g5602 i0 43 7.28820598006645 365 199 90.4 6 1199 111 124 481 OGS40598.1 MAG: cytosol nonspecific dipeptidase [Euryarchaeota archaeon RBG_13_31_8] diamond 8775 278 0.996402877697842 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon RBG_13_31_8
32020286 32020286 PRJNA379145_P_NODE_10018_length_952_cov_1.990207_g8866_i0 PRJNA379145 10018 952 1.990207 18.94677064 Stenosarchaea group 2290931 Archaea Archaea 53.9 4.85e-4   NR WP_379702573.1 376170 g8866 i0 35.8 1.40546218487395 95 53 28.4 4 6 275 113 204 WP_379702573.1 MULTISPECIES: PQQ-binding-like beta-propeller repeat protein [Haloplanus] diamond 1338 53.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus  
32477989 32477989 PRJNA379145_P_NODE_36899_length_332_cov_1.685619_g34751_i0 PRJNA379145 36899 332 1.685619 5.59625508 Methanothermobacter sp. DP 2998972 Archaea Archaea 55.1 4.48e-6   NR WP_321210882.1 2998972 g34751 i0 30.8 1.59939759036145 107 70 93.1 2 18 326 125 231 WP_321210882.1 PAS domain S-box protein [Methanothermobacter sp. DP] diamond 531 55.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanothermobacter Methanothermobacter sp. DP
32635427 32635427 PRJNA379145_P_NODE_46920_length_252_cov_1.474886_g44767_i0 PRJNA379145 46920 252 1.474886 3.71671272 Thermoplasmatota archaeon 2806419 Archaea Archaea 40.4 0.0364   NR MBU1913701.1 2806419 g44767 i0 47.4 0.452380952380952 38 20 45.2 0 241 128 1 38 MBU1913701.1 translation initiation factor IF-5A [Thermoplasmatota archaeon] diamond 114 40.4 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32730202 32730202 PRJNA379145_P_NODE_47220_length_250_cov_1.723502_g45067_i0 PRJNA379145 47220 250 1.723502 4.308755 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 144 4.7399999999999996e-42   NR HJM77902.1 2670411 g45067 i0 82.9 1.956 82 14 98.4 0 3 248 49 130 HJM77902.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Candidatus Thalassarchaeaceae archaeon] diamond 489 144 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;