contig_metadata
12 rows where bioproject = "PRJNA379145" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1675839 | 1675839 | PRJNA379145_P_NODE_68082_length_164_cov_1.908397_g65928_i0 | PRJNA379145 | 68082 | 164 | 1.908397 | 3.12977108 | Leptotrichia sp. oral taxon 847 | 1785996 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|987458696|gb|CP014231.1| | 1785996 | g65928 | i0 | 100 | 0.170731707317073 | 28 | 0 | 17 | 0 | 25 | 52 | 1704059 | 1704086 | Leptotrichia sp. oral taxon 847 strain F0260 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 847 | ||
| 4227846 | 4227846 | PRJNA379145_P_NODE_22544_length_540_cov_56.301775_g20591_i0 | PRJNA379145 | 22544 | 540 | 56.301775 | 304.029585 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 953 | 0 | NTclustered | gi|2201062197|gb|CP092519.1| | 188913 | g20591 | i0 | 98.699 | 530.196296296296 | 538 | 6 | 99 | 1 | 1 | 538 | 49409 | 48873 | Cetobacterium somerae strain CS2105-BJ chromosome, complete genome | blastn | 286306 | 953 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 4228166 | 4228166 | PRJNA379145_P_NODE_51084_length_227_cov_2.541237_g48930_i0 | PRJNA379145 | 51084 | 227 | 2.541237 | 5.76860799 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 409 | 1.04e-109 | NTclustered | gi|1708575239|dbj|AP019834.1| | 157687 | g48930 | i0 | 99.119 | 400.775330396476 | 227 | 2 | 100 | 0 | 1 | 227 | 222450 | 222224 | Leptotrichia wadei JMUB3933 DNA, complete genome | blastn | 90976 | 409 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 4901900 | 4901900 | PRJNA379145_P_NODE_17224_length_665_cov_46.696203_g15485_i0 | PRJNA379145 | 17224 | 665 | 46.696203 | 310.52974995 | Cetobacterium | 180162 | Bacteria | Bacteria | 654 | 0 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g15485 | i0 | 96.049 | 294.162406015038 | 405 | 10 | 60 | 6 | 264 | 665 | 279074 | 278673 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 195618 | 654 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 11277212 | 11277212 | PRJNA379145_P_NODE_33749_length_367_cov_1.520958_g31605_i0 | PRJNA379145 | 33749 | 367 | 1.520958 | 5.58191586 | Haliovirga abyssi | 2996794 | Bacteria | Bacteria | 170 | 2e-47 | NR | WP_307904636.1 | 2996794 | g31605 | i0 | 70.3 | 15.425068119891 | 118 | 35 | 96.5 | 0 | 361 | 8 | 456 | 573 | WP_307904636.1 ABC transporter ATP-binding protein [Haliovirga abyssi] | diamond | 5661 | 170 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Haliovirgaceae | Haliovirga | Haliovirga abyssi | ||
| 11879603 | 11879603 | PRJNA379145_P_NODE_39150_length_310_cov_4.451264_g36999_i0 | PRJNA379145 | 39150 | 310 | 4.451264 | 13.7989184 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 573 | 4.999999999999998e-159 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g36999 | i0 | 100 | 664.432258064516 | 310 | 0 | 100 | 0 | 1 | 310 | 71314 | 71623 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 205974 | 573 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 13827515 | 13827515 | PRJNA379145_P_NODE_63311_length_177_cov_3.972222_g61157_i0 | PRJNA379145 | 63311 | 177 | 3.972222 | 7.03083294 | Cetobacterium | 180162 | Bacteria | Bacteria | 239 | 1.07e-58 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g61157 | i0 | 90.96 | 5 | 177 | 16 | 100 | 0 | 1 | 177 | 81065 | 81241 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 885 | 239 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 16376411 | 16376411 | PRJNA379145_P_NODE_11433_length_879_cov_50.777778_g10138_i0 | PRJNA379145 | 11433 | 879 | 50.777778 | 446.33666862 | Fusobacterium | 848 | Bacteria | Bacteria | 1443 | 0 | NTclustered | gi|2444100754|gb|CP117525.1| | 851 | g10138 | i0 | 96.461 | 497.149032992036 | 876 | 27 | 100 | 4 | 4 | 879 | 85313 | 84442 | Fusobacterium nucleatum strain FNV chromosome, complete genome | blastn | 436994 | 1454 | 0.992434662998624 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 20200069 | 20200069 | PRJNA379145_P_NODE_19156_length_616_cov_54.015437_g17323_i0 | PRJNA379145 | 19156 | 616 | 54.015437 | 332.73509192 | Fusobacterium | 848 | Bacteria | Bacteria | 1072 | 0 | NTclustered | gi|15028908|emb|AJ307974.1| | 851 | g17323 | i0 | 98.055 | 483.412337662338 | 617 | 10 | 100 | 2 | 1 | 616 | 542 | 1157 | Fusobacterium nucleatum 23S rRNA gene, strain DSM 20482 | blastn | 297782 | 1072 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 20802500 | 20802500 | PRJNA379145_P_NODE_60497_length_187_cov_1.610390_g58343_i0 | PRJNA379145 | 60497 | 187 | 1.61039 | 3.0114293 | Haliovirga abyssi | 2996794 | Bacteria | Bacteria | 80.5 | 7.34e-11 | NTclustered | gi|2502752323|dbj|AP027059.1| | 2996794 | g58343 | i0 | 88.235 | 1.27807486631016 | 68 | 6 | 36 | 2 | 115 | 181 | 638705 | 638771 | Fusobacteria bacterium IC12 DNA, complete genome | blastn | 239 | 80.5 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Haliovirgaceae | Haliovirga | Haliovirga abyssi | ||
| 22750808 | 22750808 | PRJNA379145_P_NODE_21018_length_572_cov_39.849722_g19121_i0 | PRJNA379145 | 21018 | 572 | 39.849722 | 227.94040984 | Cetobacterium | 180162 | Bacteria | Bacteria | 857 | 0 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g19121 | i0 | 93.728 | 518.103146853147 | 574 | 33 | 100 | 3 | 1 | 572 | 278444 | 279016 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 296355 | 857 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 23353047 | 23353047 | PRJNA379145_P_NODE_58539_length_194_cov_2.248447_g56385_i0 | PRJNA379145 | 58539 | 194 | 2.248447 | 4.36198718 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 353 | 4.1e-93 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g56385 | i0 | 99.485 | 77.0979381443299 | 194 | 1 | 100 | 0 | 1 | 194 | 1995271 | 1995078 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 14957 | 353 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;