metadata: contig_metadata: 34 rows where bioproject = "PRJNA379145", tax_clade = "PVC group" and tax

34 rows where bioproject = "PRJNA379145", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

descending

Link	rowid ▼	query	bioproject	node	length	coverage	rel_abundance	taxname_lca	taxid_lca	taxoncategory	taxoncategorysimple	bits	evalue	analysis_used	target	taxid	gene	allele	pident	sumperc_cov	alnlen	mismatch	qcov	gapopen	qstart	qend	tstart	tend	target_title	analysis	sumalnlen	maxbits	bits_percmax	tax_superkingdom	tax_clade	tax_kingdom	tax_phylum	tax_class	tax_order	tax_family	tax_genus	tax_species
6778324	6778324	PRJNA379145_P_NODE_17266_length_664_cov_17.199683_g15525_i0	PRJNA379145	17266	664	17.199683	114.20589512	Chlamydiales bacterium	2047757	Bacteria	Bacteria	200	6.46e-62	NR	MCP5470421.1	2047757	g15525	i0	66.5	0.713855421686747	158	48	70	2	633	169	1	156	MCP5470421.1 hypothetical protein [Chlamydiales bacterium]	diamond	474	200	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Chlamydiales			Chlamydiales bacterium
8726765	8726765	PRJNA379145_P_NODE_69927_length_160_cov_1.165354_g67773_i0	PRJNA379145	69927	160	1.165354	1.8645664	Pseudomonadati	3379134	Bacteria	Bacteria	246	5.67e-61	NTclustered	gi\|2082223669\|gb\|CP075585.1\|	225148	g67773	i0	94.41	115.24375	161	8	100	1	1	160	1018206	1018046	Candidatus Rhabdochlamydia porcellionis strain 15C chromosome, complete genome	blastn	18439	246	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Candidatus Rhabdochlamydiaceae	Candidatus Rhabdochlamydia	Candidatus Rhabdochlamydia porcellionis
9329017	9329017	PRJNA379145_P_NODE_46208_length_256_cov_1.735426_g44055_i0	PRJNA379145	46208	256	1.735426	4.44269056	uncultured Parachlamydiaceae bacterium	464461	Bacteria	Bacteria	318	2.0799999999999998e-82	NTclustered	gi\|2874253811\|emb\|OY969795.1\|	464461	g44055	i0	89.272	102.2890625	261	18	99	9	1	254	655135	655392	MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1	blastn	26186	318	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Parachlamydiaceae		uncultured Parachlamydiaceae bacterium
11879513	11879513	PRJNA379145_P_NODE_30090_length_415_cov_2.020942_g27971_i0	PRJNA379145	30090	415	2.020942	8.3869093	root	1	Root_unresolved	Root_unresolved	166	3.2e-47	NR	NBO24982.1	2081524	g27971	i0	59	2.92048192771084	139	53	97.6	2	414	10	235	373	NBO24982.1 type III PLP-dependent enzyme [Chlamydiota bacterium]	diamond	1212	166	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota					Chlamydiota bacterium
12552571	12552571	PRJNA379145_P_NODE_51890_length_223_cov_2.278947_g49736_i0	PRJNA379145	51890	223	2.278947	5.08205181	Chlamydiia	204429	Bacteria	Bacteria	85.9	1.08e-18	NR	MBY0530065.1	2047756	g49736	i0	77.8	7.80269058295964	45	10	60.5	0	222	88	161	205	MBY0530065.1 superoxide dismutase [Rhabdochlamydiaceae bacterium]	diamond	1740	86.3	0.995365005793743	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Candidatus Rhabdochlamydiaceae		Rhabdochlamydiaceae bacterium
13154875	13154875	PRJNA379145_P_NODE_69251_length_161_cov_1.945312_g67097_i0	PRJNA379145	69251	161	1.945312	3.13195232	Simkania sp.	34094	Bacteria	Bacteria	81.3	2.23e-16	NR	MBS3904120.1	34094	g67097	i0	81.1	23.7018633540373	53	5	98.8	1	3	161	291	338	MBS3904120.1 dihydrolipoyllysine-residue succinyltransferase [Simkania sp.]	diamond	3816	81.3	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Simkaniaceae	Simkania	Simkania sp.
15703652	15703652	PRJNA379145_P_NODE_4533_length_1394_cov_3.412197_g3969_i0	PRJNA379145	4533	1394	3.412197	47.56602618	Bacteria	2	Bacteria	Bacteria	620	1.2599999999999997e-216	NR	WP_013182645.1	71667	g3969	i0	65	32.2295552367288	454	152	97.3	5	1	1356	155	603	WP_013182645.1 phosphoenolpyruvate carboxykinase (GTP) [Waddlia chondrophila]	diamond	44928	620	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Waddliaceae	Waddlia	Waddlia chondrophila
20802554	20802554	PRJNA379145_P_NODE_66177_length_169_cov_1.691176_g64023_i0	PRJNA379145	66177	169	1.691176	2.85808744	uncultured Parachlamydiaceae bacterium	464461	Bacteria	Bacteria	172	1.04e-38	NTclustered	gi\|2874253811\|emb\|OY969795.1\|	464461	g64023	i0	87.417	164.650887573964	151	17	89	2	20	169	655039	654890	MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1	blastn	27826	172	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Parachlamydiaceae		uncultured Parachlamydiaceae bacterium
23353043	23353043	PRJNA379145_P_NODE_57939_length_197_cov_1.378049_g55785_i0	PRJNA379145	57939	197	1.378049	2.71475653	uncultured Parachlamydiaceae bacterium	464461	Bacteria	Bacteria	52.8	0.017	NTclustered	gi\|2874253811\|emb\|OY969795.1\|	464461	g55785	i0	100	0.142131979695431	28	0	14	0	81	108	1011251	1011278	MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1	blastn	28	52.8	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Parachlamydiaceae		uncultured Parachlamydiaceae bacterium
27201175	27201175	PRJNA379145_P_NODE_4042_length_1461_cov_6.158964_g3530_i0	PRJNA379145	4042	1461	6.158964	89.98246404	Parachlamydia sp.	2052048	Bacteria	Bacteria	56.2	3.08e-4	NR	MCE5317746.1	2052048	g3530	i0	29.9	0.275154004106776	134	82	27.5	2	829	428	446	567	MCE5317746.1 hypothetical protein [Parachlamydia sp.]	diamond	402	56.2	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Parachlamydiaceae	Parachlamydia	Parachlamydia sp.
27849956	27849956	PRJNA379145_P_NODE_52664_length_219_cov_2.193548_g50510_i0	PRJNA379145	52664	219	2.193548	4.80387012	Neochlamydia	112987	Bacteria	Bacteria	47	8.61e-4	NR	WP_042239476.1	1353976	g50510	i0	44.3	1.67123287671233	61	32	80.8	2	218	42	301	361	WP_042239476.1 ankyrin repeat domain-containing protein [Neochlamydia sp. S13]	diamond	366	47	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Parachlamydiaceae	Neochlamydia	Neochlamydia sp. S13
27976373	27976373	PRJNA379145_P_NODE_55405_length_207_cov_1.649425_g53251_i0	PRJNA379145	55405	207	1.649425	3.41430975	Bacteria	2	Bacteria	Bacteria	83.6	9.46e-17	NR	MFT4553585.1	2047757	g53251	i0	60.3	2.84057971014493	63	25	91.3	0	5	193	633	695	MFT4553585.1 N-acetylglucosamine kinase-like BadF-type ATPase [Chlamydiales bacterium]	diamond	588	84	0.995238095238095	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Chlamydiales			Chlamydiales bacterium
28085572	28085572	PRJNA379145_P_NODE_44165_length_270_cov_1.337553_g42013_i0	PRJNA379145	44165	270	1.337553	3.6113931	Chlamydiia bacterium	2052156	Bacteria	Bacteria	57.4	1.61e-7	NR	MCH9631107.1	2052156	g42013	i0	37.2	1.71111111111111	78	48	86.7	1	3	236	39	115	MCH9631107.1 Ribonuclease HII [Chlamydiia bacterium]	diamond	462	57.4	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia				Chlamydiia bacterium
28369698	28369698	PRJNA379145_P_NODE_14666_length_747_cov_2.326331_g13089_i0	PRJNA379145	14666	747	2.326331	17.37769257	Waddliaceae bacterium	2026802	Bacteria	Bacteria	62	5.18e-7	NR	HEY4832829.1	2026802	g13089	i0	28.7	0.670682730923695	167	102	67.1	4	19	519	62	211	HEY4832829.1 hypothetical protein [Waddliaceae bacterium]	diamond	501	62	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Waddliaceae		Waddliaceae bacterium
28496266	28496266	PRJNA379145_P_NODE_41767_length_288_cov_2.470588_g39615_i0	PRJNA379145	41767	288	2.470588	7.11529344	Simkania negevensis	83561	Bacteria	Bacteria	112	1.37e-26	NR	WP_013943849.1	83561	g39615	i0	55.2	1	96	43	100	0	288	1	336	431	WP_013943849.1 adenylate/guanylate cyclase domain-containing protein [Simkania negevensis]	diamond	288	112	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Simkaniaceae	Simkania	Simkania negevensis
28513180	28513180	PRJNA379145_P_NODE_8167_length_1064_cov_3.324927_g7195_i0	PRJNA379145	8167	1064	3.324927	35.37722328	Simkania	34093	Bacteria	Bacteria	132	1.42e-32	NR	WP_013944019.1	83561	g7195	i0	33.3	1.88627819548872	237	145	66.3	6	260	964	28	253	WP_013944019.1 DUF268 domain-containing protein [Simkania negevensis]	diamond	2007	133	0.992481203007519	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Simkaniaceae	Simkania	Simkania negevensis
29285381	29285381	PRJNA379145_P_NODE_69349_length_161_cov_1.625000_g67195_i0	PRJNA379145	69349	161	1.625	2.61625	Simkania sp.	34094	Bacteria	Bacteria	102	6.42e-27	NR	MCB1084315.1	34094	g67195	i0	92.5	0.987577639751553	53	4	98.8	0	159	1	6	58	MCB1084315.1 hypothetical protein [Simkania sp.]	diamond	159	102	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Simkaniaceae	Simkania	Simkania sp.
29790394	29790394	PRJNA379145_P_NODE_13111_length_806_cov_2.164295_g11665_i0	PRJNA379145	13111	806	2.164295	17.4442177	Waddliaceae bacterium	2026802	Bacteria	Bacteria	59.3	5.42e-6	NR	HEY4832829.1	2026802	g11665	i0	33.3	0.446650124069479	120	74	44.7	2	368	727	62	175	HEY4832829.1 hypothetical protein [Waddliaceae bacterium]	diamond	360	59.3	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Waddliaceae		Waddliaceae bacterium
29917210	29917210	PRJNA379145_P_NODE_8911_length_1016_cov_21.143438_g7869_i0	PRJNA379145	8911	1016	21.143438	214.81733008	Simkania sp.	34094	Bacteria	Bacteria	299	1.18e-97	NR	MCB1084310.1	34094	g7869	i0	81.5	0.543307086614173	184	34	54.3	0	744	193	1	184	MCB1084310.1 hypothetical protein [Simkania sp.]	diamond	552	299	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Simkaniaceae	Simkania	Simkania sp.
30169581	30169581	PRJNA379145_P_NODE_40132_length_302_cov_1.535316_g37981_i0	PRJNA379145	40132	302	1.535316	4.63665432	Chlamydiota bacterium	2081524	Bacteria	Bacteria	93.6	9.61e-20	NR	NGX45594.1	2081524	g37981	i0	69.4	0.615894039735099	62	19	61.6	0	294	109	447	508	NGX45594.1 ADP-ribosyl-[dinitrogen reductase] glycohydrolase [Chlamydiota bacterium]	diamond	186	93.6	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota					Chlamydiota bacterium
30296557	30296557	PRJNA379145_P_NODE_23552_length_521_cov_28.040984_g21566_i0	PRJNA379145	23552	521	28.040984	146.09352664	Chlamydiales bacterium	2047757	Bacteria	Bacteria	223	1.11e-71	NR	MCP5470420.1	2047757	g21566	i0	78.9	0.846449136276392	147	31	84.6	0	9	449	1	147	MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium]	diamond	441	223	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Chlamydiales			Chlamydiales bacterium
30422893	30422893	PRJNA379145_P_NODE_38293_length_318_cov_2.385965_g36142_i0	PRJNA379145	38293	318	2.385965	7.5873687	Chlamydiales bacterium	2047757	Bacteria	Bacteria	75.1	3.83e-13	NR	MCE5295214.1	2047757	g36142	i0	49.5	1.73584905660377	91	40	80.2	1	257	3	525	615	MCE5295214.1 AMP-binding protein [Chlamydiales bacterium]	diamond	552	75.1	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Chlamydiales			Chlamydiales bacterium
30471345	30471345	PRJNA379145_P_NODE_5033_length_1334_cov_2.449654_g4416_i0	PRJNA379145	5033	1334	2.449654	32.67838436	Parachlamydia	83551	Bacteria	Bacteria	70.9	3.87e-9	NR	MCE5319049.1	2052048	g4416	i0	28.5	1.00974512743628	249	141	52.4	12	413	1111	47	274	MCE5319049.1 hypothetical protein [Parachlamydia sp.]	diamond	1347	70.9	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Parachlamydiaceae	Parachlamydia	Parachlamydia sp.
30864736	30864736	PRJNA379145_P_NODE_21534_length_561_cov_3.553030_g19614_i0	PRJNA379145	21534	561	3.55303	19.9324983	Chlamydiia bacterium	2052156	Bacteria	Bacteria	68.9	1.28e-10	NR	MCB1136078.1	2052156	g19614	i0	49.2	0.347593582887701	65	33	34.8	0	159	353	131	195	MCB1136078.1 U-box domain-containing protein [Chlamydiia bacterium]	diamond	195	68.9	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia				Chlamydiia bacterium
31370765	31370765	PRJNA379145_P_NODE_40716_length_297_cov_1.833333_g38565_i0	PRJNA379145	40716	297	1.833333	5.44499901	Chlamydiales bacterium	2047757	Bacteria	Bacteria	51.2	7.15e-5	NR	MCH9625893.1	2047757	g38565	i0	33.7	0.98989898989899	98	61	97	3	8	295	322	417	MCH9625893.1 N-acetylmuramic acid 6-phosphate etherase [Chlamydiales bacterium]	diamond	294	51.2	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Chlamydiales			Chlamydiales bacterium
31497245	31497245	PRJNA379145_P_NODE_59696_length_190_cov_1.605096_g57542_i0	PRJNA379145	59696	190	1.605096	3.0496824	Chlamydiales bacterium	2047757	Bacteria	Bacteria	103	6.28e-27	NR	MCP5470419.1	2047757	g57542	i0	72.6	0.978947368421053	62	17	97.9	0	1	186	33	94	MCP5470419.1 dynein light chain family protein [Chlamydiales bacterium]	diamond	186	103	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Chlamydiales			Chlamydiales bacterium
31654998	31654998	PRJNA379145_P_NODE_23197_length_528_cov_27.115152_g21217_i0	PRJNA379145	23197	528	27.115152	143.16800256	Chlamydiales bacterium	2047757	Bacteria	Bacteria	187	1.23e-57	NR	MCP5470420.1	2047757	g21217	i0	72	0.75	132	37	75	0	10	405	1	132	MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium]	diamond	396	187	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Chlamydiales			Chlamydiales bacterium
32414688	32414688	PRJNA379145_P_NODE_58059_length_196_cov_1.987730_g55905_i0	PRJNA379145	58059	196	1.98773	3.8959508	Chlamydiota bacterium	2081524	Bacteria	Bacteria	63.2	1.26e-9	NR	NNM44329.1	2081524	g55905	i0	44.6	0.994897959183674	65	36	99.5	0	195	1	267	331	NNM44329.1 SIS domain-containing protein [Chlamydiota bacterium]	diamond	195	63.2	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota					Chlamydiota bacterium
32589843	32589843	PRJNA379145_P_NODE_30539_length_409_cov_1.832447_g28413_i0	PRJNA379145	30539	409	1.832447	7.49470823	Bacteria	2	Bacteria	Bacteria	161	3.19e-46	NR	MCB1112739.1	2052156	g28413	i0	54.1	3.96088019559902	135	62	99	0	407	3	139	273	MCB1112739.1 fructosamine kinase family protein [Chlamydiia bacterium]	diamond	1620	162	0.993827160493827	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia				Chlamydiia bacterium
32621078	32621078	PRJNA379145_P_NODE_18400_length_635_cov_2.033223_g16609_i0	PRJNA379145	18400	635	2.033223	12.91096605	Candidatus Protochlamydia	282132	Bacteria	Bacteria	216	8.39e-65	NR	KIC73341.1	362787	g16609	i0	54.6	12.6992125984252	207	88	97.8	1	3	623	163	363	KIC73341.1 putative 16S rRNA m5C967 SAM-dependent methyltransferase [Candidatus Protochlamydia amoebophila]	diamond	8064	217	0.995391705069124	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Parachlamydiaceae	Candidatus Protochlamydia	Candidatus Protochlamydia amoebophila
32635362	32635362	PRJNA379145_P_NODE_13460_length_792_cov_15.057971_g11986_i0	PRJNA379145	13460	792	15.057971	119.25913032	Chlamydiales bacterium	2047757	Bacteria	Bacteria	201	1.98e-61	NR	MCP5470421.1	2047757	g11986	i0	66	0.602272727272727	159	49	59.1	2	32	499	1	157	MCP5470421.1 hypothetical protein [Chlamydiales bacterium]	diamond	477	201	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Chlamydiales			Chlamydiales bacterium
32667106	32667106	PRJNA379145_P_NODE_65960_length_170_cov_1.284672_g63806_i0	PRJNA379145	65960	170	1.284672	2.1839424	Candidatus Algichlamydia australiensis	3341976	Bacteria	Bacteria	49.7	4.96e-5	NR	MDX8431425.1	3341976	g63806	i0	48.9	0.794117647058823	45	23	79.4	0	169	35	819	863	MDX8431425.1 ankyrin repeat domain-containing protein [Candidatus Algichlamydia australiensis]	diamond	135	49.7	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Simkaniaceae	Candidatus Algichlamydia	Candidatus Algichlamydia australiensis
32761572	32761572	PRJNA379145_P_NODE_24900_length_497_cov_8.577586_g22875_i0	PRJNA379145	24900	497	8.577586	42.63060242	Chlamydiales bacterium	2047757	Bacteria	Bacteria	214	1.82e-68	NR	MCP5470420.1	2047757	g22875	i0	74.8	0.911468812877264	151	38	91.1	0	2	454	3	153	MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium]	diamond	453	214	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Chlamydiales			Chlamydiales bacterium
32904446	32904446	PRJNA379145_P_NODE_18380_length_635_cov_3.965116_g16590_i0	PRJNA379145	18380	635	3.965116	25.1784866	Pseudomonadati	3379134	Bacteria	Bacteria	105	1.5999999999999999e-24	NR	WP_041016860.1	340071	g16590	i0	39.4	2.31496062992126	165	95	76.1	2	493	11	1	164	WP_041016860.1 translation initiation factor IF-3 [Criblamydia sequanensis]	diamond	1470	105	1	Bacteria	PVC group	Pseudomonadati	Chlamydiota	Chlamydiia	Parachlamydiales	Candidatus Criblamydiaceae	Candidatus Criblamydia	Candidatus Criblamydia sequanensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;