RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA379145", tax_clade = "Bacteria candidate phyla" and tax_phylum = "candidate division WOR-3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA379145 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28544954 28544954 PRJNA379145_P_NODE_57067_length_200_cov_1.862275_g54913_i0 PRJNA379145 57067 200 1.862275 3.72455 Bacillati 1783272 Bacteria Bacteria 75.5 1.48e-14   NR MCS7244565.1 2052148 g54913 i0 57.6 2.85 66 28 99 0 198 1 157 222 MCS7244565.1 3-oxoacyl-[acyl-carrier-protein] reductase [candidate division WOR-3 bacterium] diamond 570 75.5 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
28797104 28797104 PRJNA379145_P_NODE_16087_length_699_cov_4.951952_g14407_i0 PRJNA379145 16087 699 4.951952 34.61414448 Bacteria 2 Bacteria Bacteria 98.6 4.88e-21   NR MEO0275321.1 2052148 g14407 i0 36.1 6.65665236051502 191 107 79.8 6 559 2 21 201 MEO0275321.1 50S ribosomal protein L1 [candidate division WOR-3 bacterium] diamond 4653 99 0.995959595959596 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
31370806 31370806 PRJNA379145_P_NODE_65916_length_170_cov_1.430657_g63762_i0 PRJNA379145 65916 170 1.430657 2.4321169 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 45.1 0.00212   NR MBN1150537.1 2052148 g63762 i0 50 2.36470588235294 48 23 82.9 1 169 29 159 206 MBN1150537.1 SMP-30/gluconolactonase/LRE family protein [candidate division WOR-3 bacterium] diamond 402 45.1 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;