RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA376117", tax_phylum = "Promethearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Promethearchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA376117 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24025329 24025329 PRJNA376117_P_NODE_15639_length_347_cov_1.503650_g15337_i0 PRJNA376117 15639 347 1.50365 5.2176655 Promethearchaeia archaeon 3067280 Archaea Archaea 160 5.649999999999999e-45   NR HMF32030.1 3067280 g15337 i0 67 0.968299711815562 112 37 96.8 0 3 338 109 220 HMF32030.1 acetyl-CoA C-acyltransferase [Promethearchaeia archaeon] diamond 336 160 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
32495003 32495003 PRJNA376117_P_NODE_10719_length_411_cov_1.366864_g10417_i0 PRJNA376117 10719 411 1.366864 5.61781104 Promethearchaeum 3366645 Archaea Archaea 197 1.11e-58   NR OLS14603.1 1849166 g10417 i0 68.4 5.95620437956204 136 43 99.3 0 410 3 270 405 OLS14603.1 MAG: acetyl-CoA acetyltransferase [Promethearchaeota archaeon CR_4] diamond 2448 197 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;