RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA376117", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 7 ✖

tax_phylum 1

  • Pisuviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA376117 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1674370 1674370 PRJNA376117_P_NODE_14402_length_361_cov_1.069444_g14100_i0 PRJNA376117 14402 361 1.069444 3.86069284 Torradovirus arctii 3432934 Viruses Viruses 494 4.7299999999999997e-135   NTclustered gi|2465182108|gb|OQ087134.1| 3036445 g14100 i0 92.464 0.955678670360111 345 26 96 0 11 355 6647 6991 Burdock mosaic virus isolate IM segment RNA1, complete sequence blastn 345 494 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Torradovirus Torradovirus arctii
9327798 9327798 PRJNA376117_P_NODE_15588_length_348_cov_0.963636_g15286_i0 PRJNA376117 15588 348 0.963636 3.35345328 Torradovirus arctii 3432934 Viruses Viruses 411 4.719999999999999e-110   NTclustered gi|2465182129|gb|OQ087135.1| 3036445 g15286 i0 87.931 1 348 42 100 0 1 348 2642 2989 Burdock mosaic virus isolate IM segment RNA2, complete sequence blastn 348 411 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Torradovirus Torradovirus arctii
16977064 16977064 PRJNA376117_P_NODE_16254_length_341_cov_1.723881_g15952_i0 PRJNA376117 16254 341 1.723881 5.87843421 rice curl dwarf-associated dicistro-like virus 1 3377419 Viruses Viruses 99 4.08e-16   NTclustered gi|2798384081|gb|PQ241063.1| 3377419 g15952 i0 76.042 0.762463343108504 192 45 56 1 52 243 6557 6367 Rice curl dwarf-associated dicistro-like virus 1 isolate SY1, complete genome blastn 260 99 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   rice curl dwarf-associated dicistro-like virus 1
18251283 18251283 PRJNA376117_P_NODE_12195_length_388_cov_1.450794_g11893_i0 PRJNA376117 12195 388 1.450794 5.62908072 Torradovirus arctii 3432934 Viruses Viruses 424 6.82e-114   NTclustered gi|2465182108|gb|OQ087134.1| 3036445 g11893 i0 86.649 0.984536082474227 382 51 98 0 7 388 5423 5042 Burdock mosaic virus isolate IM segment RNA1, complete sequence blastn 382 424 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Torradovirus Torradovirus arctii
28496180 28496180 PRJNA376117_P_NODE_16067_length_343_cov_1.233333_g15765_i0 PRJNA376117 16067 343 1.233333 4.23033219 Burdock mosaic virus 3036445 Viruses Viruses 229 6.729999999999999e-67   NR WEU75084.1 3036445 g15765 i0 98.2 0.997084548104956 114 2 99.7 0 2 343 1504 1617 WEU75084.1 polyprotein [Burdock mosaic virus] diamond 342 229 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Torradovirus Torradovirus arctii
30391321 30391321 PRJNA376117_P_NODE_9633_length_433_cov_1.800000_g9331_i0 PRJNA376117 9633 433 1.8 7.794 rice curl dwarf-associated dicistro-like virus 1 3377419 Viruses Viruses 56.2 5.71e-6   NR XFO60888.1 3377419 g9331 i0 42.4 0.685912240184757 59 34 40.9 0 429 253 789 847 XFO60888.1 structural polyprotein [rice curl dwarf-associated dicistro-like virus 1] diamond 297 56.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   rice curl dwarf-associated dicistro-like virus 1
31908181 31908181 PRJNA376117_P_NODE_26757_length_277_cov_1.132353_g26455_i0 PRJNA376117 26757 277 1.132353 3.13661781 Burdock mosaic virus 3036445 Viruses Viruses 174 2.6499999999999997e-48   NR WEU75084.1 3036445 g26455 i0 94.6 0.996389891696751 92 5 99.6 0 2 277 1882 1973 WEU75084.1 polyprotein [Burdock mosaic virus] diamond 276 174 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Torradovirus Torradovirus arctii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;