RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA376117", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA376117 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27201120 27201120 PRJNA376117_P_NODE_42602_length_243_cov_0.905882_g42300_i0 PRJNA376117 42602 243 0.905882 2.20129326 Nitrososphaerota archaeon 2026795 Archaea Archaea 58.2 1.11e-7   NR RZD32614.1 2026795 g42300 i0 42.4 0.814814814814815 66 34 81.5 2 6 203 68 129 RZD32614.1 MAG: hypothetical protein CXT79_05995 [Nitrososphaerota archaeon] diamond 198 58.2 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32003156 32003156 PRJNA376117_P_NODE_32638_length_255_cov_1.269231_g32336_i0 PRJNA376117 32638 255 1.269231 3.23653905 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 61.6 8.62e-9   NR MCJ7637429.1 2169593 g32336 i0 40.7 2.74117647058824 81 44 95.3 1 6 248 159 235 MCJ7637429.1 site-specific DNA-methyltransferase [Nitrososphaeraceae archaeon] diamond 699 61.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;