RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA376117" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA376117 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27137676 27137676 PRJNA376117_P_NODE_37802_length_247_cov_1.729885_g37500_i0 PRJNA376117 37802 247 1.729885 4.27281595 Balneolaceae bacterium 2053516 Bacteria Bacteria 124 1.2499999999999999e-31   NR MEX2456966.1 2053516 g37500 i0 72.8 8.85425101214575 81 22 98.4 0 3 245 349 429 MEX2456966.1 thiolase family protein [Balneolaceae bacterium] diamond 2187 124 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
32509661 32509661 PRJNA376117_P_NODE_41839_length_243_cov_1.717647_g41537_i0 PRJNA376117 41839 243 1.717647 4.17388221 Balneolaceae bacterium 2053516 Bacteria Bacteria 52.8 1.13e-5   NR TVR33802.1 2053516 g41537 i0 34.7 0.925925925925926 75 49 92.6 0 19 243 738 812 TVR33802.1 MAG: hypothetical protein EA390_03715 [Balneolaceae bacterium] diamond 225 52.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;