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contig_metadata

16 rows where bioproject = "PRJNA376117" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA376117 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8053041 8053041 PRJNA376117_P_NODE_23607_length_287_cov_1.439252_g23305_i0 PRJNA376117 23607 287 1.439252 4.13065324 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 174 1.14e-51   NR XP_003885635.1 572307 g23305 i0 83.9 2.93728222996516 93 15 97.2 0 9 287 66 158 XP_003885635.1 putative mitochondrial carrier domain-containing protein [Neospora caninum Liverpool] diamond 843 175 0.994285714285714 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
24025455 24025455 PRJNA376117_P_NODE_31539_length_259_cov_1.575269_g31237_i0 PRJNA376117 31539 259 1.575269 4.07994671 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.024   NTclustered gi|1084921234|ref|XM_018787997.1| 647221 g31237 i0 100 0.216216216216216 28 0 11 0 10 37 1061 1034 Plasmodium gaboni putative exodeoxyribonuclease III partial mRNA blastn 56 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
24626119 24626119 PRJNA376117_P_NODE_29300_length_267_cov_2.149485_g28998_i0 PRJNA376117 29300 267 2.149485 5.73912495 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.024   NTclustered gi|697894472|ref|XM_009694180.1| 869250 g28998 i0 100 0.104868913857678 28 0 10 0 10 37 1908 1881 Theileria orientalis strain Shintoku conserved hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
25299933 25299933 PRJNA376117_P_NODE_32280_length_256_cov_1.683060_g31978_i0 PRJNA376117 32280 256 1.68306 4.3086336 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|820700576|tpe|LN714500.1| 432359 g31978 i0 94.444 11.27734375 36 2 14 0 220 255 5085201 5085166 TPA_asm: Toxoplasma gondii VEG, chromosome chrX, complete genome blastn 2887 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
26885218 26885218 PRJNA376117_P_NODE_21461_length_298_cov_1.817778_g21159_i0 PRJNA376117 21461 298 1.817778 5.41697844 Plasmodium inui San Antonio 1 1237626 SAR_Eukaryotes SAR_Eukaryotes 90.9 1e-20   NR XP_008815161.1 1237626 g21159 i0 56.3 2.52684563758389 80 35 80.5 0 39 278 9 88 XP_008815161.1 V-type proton ATPase proteolipid subunit [Plasmodium inui San Antonio 1] diamond 753 90.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium inui
27359530 27359530 PRJNA376117_P_NODE_24323_length_285_cov_1.212264_g24021_i0 PRJNA376117 24323 285 1.212264 3.4549524 Babesia ovis 5869 SAR_Eukaryotes SAR_Eukaryotes 73.2 1.23e-12   NR GFE53671.1 5869 g24021 i0 44 3.8 91 49 94.7 2 14 283 976 1065 GFE53671.1 karyopherin beta [Babesia ovis] diamond 1083 73.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
27675385 27675385 PRJNA376117_P_NODE_9944_length_427_cov_0.867232_g9642_i0 PRJNA376117 9944 427 0.867232 3.70308064 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 55.8 2.02e-6   NR XP_029216348.1 94643 g9642 i0 31.3 1.46135831381733 96 59 65.3 4 89 367 1 92 XP_029216348.1 RNA recognition motif-containing protein [Besnoitia besnoiti] diamond 624 55.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
29316961 29316961 PRJNA376117_P_NODE_39769_length_245_cov_1.790698_g39467_i0 PRJNA376117 39769 245 1.790698 4.3872101 Theileria annulata 5874 SAR_Eukaryotes SAR_Eukaryotes 116 8.46e-31   NR XP_954212.1 5874 g39467 i0 64.9 1.81224489795918 74 26 90.6 0 2 223 98 171 XP_954212.1 60S ribosomal protein l3, putative [Theileria annulata] diamond 444 116 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
29506330 29506330 PRJNA376117_P_NODE_13530_length_371_cov_1.546980_g13228_i0 PRJNA376117 13530 371 1.54698 5.7392958 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 85.5 1.82e-16   NR XP_011131585.1 110365 g13228 i0 50.6 0.638814016172507 79 37 62.3 1 288 58 610 688 XP_011131585.1 putative thrombospondin type 1 domain protein [Gregarina niphandrodes] diamond 237 85.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
29537906 29537906 PRJNA376117_P_NODE_25370_length_281_cov_1.480769_g25068_i0 PRJNA376117 25370 281 1.480769 4.16096089 Cryptosporidium sp. chipmunk genotype I 1280935 SAR_Eukaryotes SAR_Eukaryotes 59.3 5.9e-8   NR XP_067202630.1 1280935 g25068 i0 47.5 0.65124555160142406 61 30 65.1 1 3 185 186 244 XP_067202630.1 acyl-binding protein [Cryptosporidium sp. chipmunk genotype I] diamond 183 59.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium sp. chipmunk genotype I
29586352 29586352 PRJNA376117_P_NODE_14650_length_358_cov_1.182456_g14348_i0 PRJNA376117 14650 358 1.182456 4.23319248 root 1 Root_unresolved Root_unresolved 103 2.86e-23   NR KAK9174059.1 93969 g14348 i0 44.8 4.87709497206704 116 57 94.7 3 351 13 244 355 KAK9174059.1 CpTSP10 protein/Kringle domain containing protein [Cryptosporidium meleagridis] diamond 1746 104 0.990384615384615 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium meleagridis
31908184 31908184 PRJNA376117_P_NODE_32557_length_255_cov_1.681319_g32255_i0 PRJNA376117 32557 255 1.681319 4.28736345 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 89 2.48e-18   NR XP_026194024.1 88456 g32255 i0 47 3.83529411764706 83 44 97.6 0 1 249 585 667 XP_026194024.1 SCO-spondin, partial [Cyclospora cayetanensis] diamond 978 89 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
32336849 32336849 PRJNA376117_P_NODE_44939_length_236_cov_2.177914_g44637_i0 PRJNA376117 44939 236 2.177914 5.13987704 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 125 2.6799999999999996e-31   NR KAK1441720.1 33632 g44637 i0 62.8 1.97033898305085 78 29 99.2 0 3 236 580 657 KAK1441720.1 S-adenosyl-l-methionine-dependent tRNA 4-demethylwyosine synthase [Babesia gibsoni] diamond 465 126 0.992063492063492 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia gibsoni
32635344 32635344 PRJNA376117_P_NODE_28840_length_269_cov_1.566327_g28538_i0 PRJNA376117 28840 269 1.566327 4.21341963 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 60.1 3.12e-9   NR UKJ88711.2 68886 g28538 i0 49.1 1.23791821561338 57 29 63.6 0 99 269 6 62 UKJ88711.2 60S ribosomal protein L35a [Theileria orientalis] diamond 333 60.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
32761515 32761515 PRJNA376117_P_NODE_20080_length_308_cov_3.480851_g19778_i0 PRJNA376117 20080 308 3.480851 10.72102108 Babesia gibsoni 33632 SAR_Eukaryotes SAR_Eukaryotes 58.9 4.2e-8   NR KAK1443901.1 33632 g19778 i0 45.2 1.20779220779221 62 33 60.4 1 264 79 115 175 KAK1443901.1 hypothetical protein BgAZ_207770 [Babesia gibsoni] diamond 372 58.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia gibsoni
32792778 32792778 PRJNA376117_P_NODE_34980_length_250_cov_0.870056_g34678_i0 PRJNA376117 34980 250 0.870056 2.17514 Neospora caninum Liverpool 572307 SAR_Eukaryotes SAR_Eukaryotes 56.2 7.1e-7   NR XP_003885793.1 572307 g34678 i0 40.8 3.012 49 29 58.8 0 221 75 403 451 XP_003885793.1 putative zinc finger (CCCH type) protein [Neospora caninum Liverpool] diamond 753 56.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;