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contig_metadata

17 rows where bioproject = "PRJNA376117", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 17 ✖

tax_kingdom 1

  • Metazoa · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA376117 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5503387 5503387 PRJNA376117_P_NODE_2385_length_958_cov_20.601130_g2135_i0 PRJNA376117 2385 958 20.60113 197.3588254 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 1480 0   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g2135 i0 94.931 22.6597077244259 947 44 99 4 7 951 8984 8040 Stenostomum sthenum mitochondrion, complete genome blastn 21708 1480 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
7451520 7451520 PRJNA376117_P_NODE_14866_length_355_cov_2.063830_g14564_i0 PRJNA376117 14866 355 2.06383 7.3265965 Metazoa 33208 Platyhelminthes Platyhelminthes 656 0   NTclustered gi|60687563|gb|AY914894.1| 6182 g14564 i0 100 100 355 0 100 0 1 355 40 394 Schistosoma japonicum unknown mRNA blastn 35500 656 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
8726260 8726260 PRJNA376117_P_NODE_13587_length_370_cov_2.821549_g13285_i0 PRJNA376117 13587 370 2.821549 10.4397313 Opisthokonta 33154 Platyhelminthes Platyhelminthes 196 1.5599999999999998e-61   NR THD26469.1 6192 g13285 i0 96.3 90.2756756756757 107 4 86.8 0 322 2 36 142 THD26469.1 histone H3 [Fasciola hepatica] diamond 33402 197 0.99492385786802 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
10001810 10001810 PRJNA376117_P_NODE_26808_length_276_cov_2.650246_g26506_i0 PRJNA376117 26808 276 2.650246 7.31467896 Protopolystoma xenopodis 117903 Platyhelminthes Platyhelminthes 132 9.94e-34   NR VEL23967.1 117903 g26506 i0 73.6 2.96739130434783 91 23 98.9 1 2 274 244 333 VEL23967.1 unnamed protein product [Protopolystoma xenopodis] diamond 819 132 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Polystomatidea Polystomatidae Protopolystoma Protopolystoma xenopodis
11878811 11878811 PRJNA376117_P_NODE_4190_length_672_cov_4.420701_g3902_i0 PRJNA376117 4190 672 4.420701 29.70711072 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 459 3.3799999999999996e-124   NTclustered gi|226478901|emb|FN317215.1| 6182 g3902 i0 81.416 50.6964285714286 565 101 84 3 17 579 620 58 Schistosoma japonicum isolate Anhui full length mRNA clone SJFCE0797|FSE_080_96_H12, complete sequence blastn 34068 459 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
16376086 16376086 PRJNA376117_P_NODE_16653_length_337_cov_2.041667_g16351_i0 PRJNA376117 16653 337 2.041667 6.88041779 Metazoa 33208 Platyhelminthes Platyhelminthes 303 7.95e-78   NTclustered gi|58197522|dbj|AB200392.1| 6161 g16351 i0 85.517 45.9940652818991 290 42 86 0 2 291 332 43 Dugesia japonica CaM mRNA for calmodulin, complete cds blastn 15500 303 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
23351734 23351734 PRJNA376117_P_NODE_21759_length_296_cov_1.896861_g21457_i0 PRJNA376117 21759 296 1.896861 5.61470856 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 289 1.9199999999999996e-73   NTclustered gi|393794039|dbj|AK388636.1| 6161 g21457 i0 84.775 96.5675675675676 289 42 97 2 9 296 1023 736 Dugesia japonica cDNA, clone: Dj_aH_000_00546HH.full, full-insert sequence, expressed in adult head blastn 28584 289 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
23352048 23352048 PRJNA376117_P_NODE_4119_length_680_cov_2.848435_g3831_i0 PRJNA376117 4119 680 2.848435 19.369358 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 977 0   NTclustered gi|1369885|gb|L78441.1|SCM14332R 6183 g3831 i0 94.219 20.7470588235294 640 37 94 0 41 680 1 640 Schistosoma mansoni 14-3-3-2 mRNA, 3' end of cds blastn 14108 977 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
23352139 23352139 PRJNA376117_P_NODE_7739_length_481_cov_2.840686_g7438_i0 PRJNA376117 7739 481 2.840686 13.66369966 Schmidtea mediterranea 79327 Platyhelminthes Platyhelminthes 375 2.4499999999999997e-99   NTclustered gi|21308066|gb|AY067433.1| 79327 g7438 i0 83.838 75.1829521829522 396 62 82 2 87 481 1 395 Schmidtea mediterranea unknown mRNA sequence blastn 36163 375 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Schmidtea Schmidtea mediterranea
24626031 24626031 PRJNA376117_P_NODE_22220_length_293_cov_1.395455_g21918_i0 PRJNA376117 22220 293 1.395455 4.08868315 Schmidtea mediterranea 79327 Platyhelminthes Platyhelminthes 246 1.16e-60   NTclustered gi|1929250148|gb|MT664960.1| 79327 g21918 i0 83.212 6.86348122866894 274 40 92 5 22 292 76 346 Schmidtea mediterranea protein phosphatase 1 catalytic subunit alpha (PPP1CA) mRNA, complete cds blastn 2011 246 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Schmidtea Schmidtea mediterranea
28843196 28843196 PRJNA376117_P_NODE_32208_length_256_cov_2.825137_g31906_i0 PRJNA376117 32208 256 2.825137 7.23235072 Echinostoma caproni 27848 Platyhelminthes Platyhelminthes 131 6.529999999999999e-37   NR VDP86454.1 27848 g31906 i0 84.4 7.3125 77 12 90.2 0 3 233 77 153 VDP86454.1 unnamed protein product [Echinostoma caproni] diamond 1872 131 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Echinostomatidae Echinostoma Echinostoma caproni
29081540 29081540 PRJNA376117_P_NODE_13148_length_375_cov_9.019868_g12846_i0 PRJNA376117 13148 375 9.019868 33.824505 Cyclophyllidea 6201 Platyhelminthes Platyhelminthes 51.6 9.94e-5   NR CDS37392.1 6211 g12846 i0 41.3 1.784 75 32 56.8 4 78 290 206 272 CDS37392.1 calbindin 32 [Echinococcus multilocularis] diamond 669 51.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus multilocularis
29253590 29253590 PRJNA376117_P_NODE_34089_length_251_cov_0.865169_g33787_i0 PRJNA376117 34089 251 0.865169 2.17157419 Mesocestoides corti 53468 Platyhelminthes Platyhelminthes 82.8 3.31e-16   NR VDD84003.1 53468 g33787 i0 51.8 2.96414342629482 83 39 99.2 1 1 249 212 293 VDD84003.1 unnamed protein product [Mesocestoides corti] diamond 744 82.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Mesocestoididae Mesocestoides Mesocestoides corti
29965695 29965695 PRJNA376117_P_NODE_5991_length_551_cov_1.334728_g5692_i0 PRJNA376117 5991 551 1.334728 7.35435128 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 93.2 1.85e-18   NR XP_018644327.1 6183 g5692 i0 36.7 14.929219600726 158 97 85.5 3 508 38 2 157 XP_018644327.1 guanosine-diphosphatase, putative [Schistosoma mansoni] diamond 8226 93.6 0.995726495726496 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
31085952 31085952 PRJNA376117_P_NODE_23875_length_286_cov_1.807512_g23573_i0 PRJNA376117 23875 286 1.807512 5.16948432 Opisthorchis viverrini 6198 Platyhelminthes Platyhelminthes 102 3.659999999999999e-23   NR ABD64147.1 6198 g23573 i0 55.7 16.2482517482517 97 39 99.7 2 2 286 101 195 ABD64147.1 legumain [Opisthorchis viverrini] diamond 4647 102 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
31387770 31387770 PRJNA376117_P_NODE_23996_length_286_cov_1.323944_g23694_i0 PRJNA376117 23996 286 1.323944 3.78647984 Opisthokonta 33154 Platyhelminthes Platyhelminthes 172 1.8e-47   NR KAG5445594.1 79923 g23694 i0 78.9 22.9195804195804 95 20 99.7 0 285 1 151 245 KAG5445594.1 Alanine--tRNA ligase, cytoplasmic [Clonorchis sinensis] diamond 6555 172 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Clonorchis Clonorchis sinensis
32146851 32146851 PRJNA376117_P_NODE_27778_length_273_cov_1.275000_g27476_i0 PRJNA376117 27778 273 1.275 3.48075 Metazoa 33208 Platyhelminthes Platyhelminthes 89.4 2.16e-18   NR KAK4472448.1 38744 g27476 i0 50.6 23.021978021978 87 39 95.6 1 271 11 489 571 KAK4472448.1 hypothetical protein MN116_002578 [Schistosoma mekongi] diamond 6285 90.1 0.992230854605993 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mekongi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;