RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA376117", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA376117 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22750603 22750603 PRJNA376117_P_NODE_37738_length_247_cov_1.770115_g37436_i0 PRJNA376117 37738 247 1.770115 4.37218405 Fimbriimonas 1005038 Bacteria Bacteria 316 7.17e-82   NTclustered gi|663071213|gb|CP007139.1| 661478 g37436 i0 91.064 183.052631578947 235 20 95 1 13 247 28185 28418 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 45214 316 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
24025404 24025404 PRJNA376117_P_NODE_24839_length_283_cov_1.461905_g24537_i0 PRJNA376117 24839 283 1.461905 4.13719115 Fimbriimonas 1005038 Bacteria Bacteria 381 2.929999999999999e-101   NTclustered gi|663071213|gb|CP007139.1| 661478 g24537 i0 91.166 84.3498233215548 283 22 99 3 3 283 29490 29771 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 23871 381 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;