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contig_metadata

31 rows where bioproject = "PRJNA376117" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 31 ✖

bioproject 1

  • PRJNA376117 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
399721 399721 PRJNA376117_P_NODE_16541_length_338_cov_2.452830_g16239_i0 PRJNA376117 16541 338 2.45283 8.2905654 Chlorophyta 3041 Plants Plants 160 1.42e-48   NR MEW5307418.1 2578422 g16239 i0 77 7.1094674556213 100 23 88.8 0 24 323 1 100 MEW5307418.1 hypothetical protein [Sanguina aurantia] diamond 2403 161 0.993788819875776 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Sanguina Sanguina aurantia
400081 400081 PRJNA376117_P_NODE_40101_length_245_cov_0.895349_g39799_i0 PRJNA376117 40101 245 0.895349 2.19360505 Chlorophyceae 3166 Plants Plants 143 1.75e-37   NR KXZ45807.1 33097 g39799 i0 85.2 32.730612244898 81 12 99.2 0 244 2 315 395 KXZ45807.1 hypothetical protein GPECTOR_50g601 [Gonium pectorale] diamond 8019 144 0.993055555555556 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
8052976 8052976 PRJNA376117_P_NODE_19787_length_311_cov_1.294118_g19485_i0 PRJNA376117 19787 311 1.294118 4.02470698 Eukaryota 2759 Plants Plants 195 4.17e-56   NR XP_013905124.1 145388 g19485 i0 88.3 31.7749196141479 103 12 99.4 0 310 2 457 559 XP_013905124.1 transitional endoplasmic reticulum ATPase, partial [Monoraphidium neglectum] diamond 9882 196 0.994897959183674 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
11878907 11878907 PRJNA376117_P_NODE_9650_length_433_cov_1.283333_g9348_i0 PRJNA376117 9650 433 1.283333 5.55683189 Micractinium sp. CCAP 211/92 554058 Plants Plants 221 5.0999999999999996e-70   NR KAL4450725.1 554058 g9348 i0 72 3.96997690531178 143 40 99.1 0 2 430 81 223 KAL4450725.1 hypothetical protein ABPG77_001081 [Micractinium sp. CCAP 211/92] diamond 1719 221 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium sp. CCAP 211/92
16376103 16376103 PRJNA376117_P_NODE_19853_length_311_cov_0.785714_g19551_i0 PRJNA376117 19853 311 0.785714 2.44357054 Eukaryota 2759 Plants Plants 536 6.579999999999997e-148   NTclustered gi|1714003650|gb|MN243923.1| 3079 g19551 i0 98.361 97.5659163987138 305 5 98 0 7 311 879 575 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 30343 536 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
16977183 16977183 PRJNA376117_P_NODE_25594_length_280_cov_3.811594_g25292_i0 PRJNA376117 25594 280 3.811594 10.6724632 Chlorellales 35460 Plants Plants 95.9 1.25e-20   NR PSC76207.1 554055 g25292 i0 47.8 3.85714285714286 90 46 95.4 1 4 270 426 515 PSC76207.1 dipeptidyl aminopeptidase acylaminoacyl peptidase [Micractinium conductrix] diamond 1080 96.7 0.991726990692865 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
19525829 19525829 PRJNA376117_P_NODE_34536_length_250_cov_2.067797_g34234_i0 PRJNA376117 34536 250 2.067797 5.1694925 Eukaryota 2759 Plants Plants 156 5.32e-42   NR PRW56325.1 3076 g34234 i0 91.6 209.16 83 7 99.6 0 249 1 690 772 PRW56325.1 cell division cycle 48-like protein [Chlorella sorokiniana] diamond 52290 156 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
26902331 26902331 PRJNA376117_P_NODE_35561_length_250_cov_0.870056_g35259_i0 PRJNA376117 35561 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 102 5.28e-24   NR KAK9814236.1 41462 g35259 i0 65.8 14.532 79 27 94.8 0 250 14 140 218 KAK9814236.1 hypothetical protein WJX72_002691 [[Myrmecia] bisecta] diamond 3633 103 0.990291262135922 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
27060381 27060381 PRJNA376117_P_NODE_13002_length_377_cov_1.996711_g12700_i0 PRJNA376117 13002 377 1.996711 7.52760047 Eukaryota 2759 Plants Plants 206 1.34e-61   NR WIA17749.1 3088 g12700 i0 78.4 40.7824933687003 125 27 99.5 0 377 3 78 202 WIA17749.1 hypothetical protein OEZ85_009263 [Tetradesmus obliquus] diamond 15375 207 0.995169082125604 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
27787130 27787130 PRJNA376117_P_NODE_35764_length_249_cov_1.482955_g35462_i0 PRJNA376117 35764 249 1.482955 3.69255795 Trebouxia 13786 Plants Plants 61.2 4.75e-9   NR KAA6425250.1 2608996 g35462 i0 40.5 2.85542168674699 79 47 95.2 0 11 247 100 178 KAA6425250.1 MAG: box C D snoRNA 1-like [Trebouxia sp. A1-2] diamond 711 61.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
27896040 27896040 PRJNA376117_P_NODE_33205_length_253_cov_1.066667_g32903_i0 PRJNA376117 33205 253 1.066667 2.69866751 Chlamydomonas eustigma 1157962 Plants Plants 113 2.4799999999999996e-29   NR GAX80981.1 1157962 g32903 i0 65.8 2.8102766798419 79 27 93.7 0 237 1 1 79 GAX80981.1 hypothetical protein CEUSTIGMA_g8416.t1 [Chlamydomonas eustigma] diamond 711 113 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
28148875 28148875 PRJNA376117_P_NODE_43085_length_242_cov_0.911243_g42783_i0 PRJNA376117 43085 242 0.911243 2.20520806 Coccomyxa viridis 1274662 Plants Plants 54.7 2.24e-6   NR CAK0735830.1 1274662 g42783 i0 41.2 0.84297520661157 68 34 81.8 2 40 237 245 308 CAK0735830.1 hypothetical protein CVIRNUC_000646 [Coccomyxa viridis] diamond 204 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
28180093 28180093 PRJNA376117_P_NODE_30946_length_261_cov_1.664894_g30644_i0 PRJNA376117 30946 261 1.664894 4.34537334 Coccomyxa viridis 1274662 Plants Plants 55.8 1.09e-6   NR CAL5219459.1 1274662 g30644 i0 50 1 38 19 43.7 0 32 145 261 298 CAL5219459.1 g1294 [Coccomyxa viridis] diamond 261 55.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
28274930 28274930 PRJNA376117_P_NODE_30146_length_264_cov_1.612565_g29844_i0 PRJNA376117 30146 264 1.612565 4.2571716 Haematococcus lacustris 44745 Plants Plants 45.1 0.00739   NR KAJ9524272.1 44745 g29844 i0 51.5 0.375 33 16 37.5 0 165 263 157 189 KAJ9524272.1 hypothetical protein QJQ45_008472 [Haematococcus lacustris] diamond 99 45.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
28544924 28544924 PRJNA376117_P_NODE_29427_length_267_cov_1.422680_g29125_i0 PRJNA376117 29427 267 1.42268 3.7985556 Eukaryota 2759 Plants Plants 60.8 9.46e-9   NR WIA10651.1 3088 g29125 i0 49.2 1.38202247191011 59 30 66.3 0 56 232 70 128 WIA10651.1 hypothetical protein OEZ85_010831 [Tetradesmus obliquus] diamond 369 60.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
28576242 28576242 PRJNA376117_P_NODE_14007_length_365_cov_4.027397_g13705_i0 PRJNA376117 14007 365 4.027397 14.69999905 Eukaryota 2759 Plants Plants 48.9 5.8e-4   NR WIA28476.1 3088 g13705 i0 47.7 0.715068493150685 44 23 36.2 0 344 213 2 45 WIA28476.1 hypothetical protein OEZ86_011020 [Tetradesmus obliquus] diamond 261 49.3 0.991886409736308 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
29001630 29001630 PRJNA376117_P_NODE_13088_length_376_cov_2.250825_g12786_i0 PRJNA376117 13088 376 2.250825 8.463102 Trebouxia sp. C 2796353 Plants Plants 94 5.85e-22   NR KAL3132346.1 3373145 g12786 i0 51.5 1.55585106382979 97 47 77.4 0 359 69 20 116 KAL3132346.1 60S ribosomal protein L36 [Trebouxia sp. C0010 RCD-2024] diamond 585 94 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0010 RCD-2024
30043211 30043211 PRJNA376117_P_NODE_29511_length_267_cov_1.190722_g29209_i0 PRJNA376117 29511 267 1.190722 3.17922774 Ostreobium quekettii 121088 Plants Plants 60.8 2.05e-8   NR CAD7705103.1 121088 g29209 i0 34.7 0.842696629213483 75 49 84.3 0 233 9 147 221 CAD7705103.1 unnamed protein product [Ostreobium quekettii] diamond 225 60.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
30296528 30296528 PRJNA376117_P_NODE_40572_length_245_cov_0.895349_g40270_i0 PRJNA376117 40572 245 0.895349 2.19360505 Coccomyxa sp. Obi 2315456 Plants Plants 53.9 1.24e-6   NR BDA42369.1 2315456 g40270 i0 52.3 0.538775510204082 44 21 53.9 0 3 134 101 144 BDA42369.1 40S ribosomal protein S19 [Coccomyxa sp. Obi] diamond 132 53.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
30391309 30391309 PRJNA376117_P_NODE_24453_length_284_cov_1.933649_g24151_i0 PRJNA376117 24453 284 1.933649 5.49156316 Trebouxia sp. C 2796353 Plants Plants 136 2.82e-38   NR KAL0041041.1 2905653 g24151 i0 76 3.02112676056338 96 20 99.3 3 283 2 64 158 KAL0041041.1 hypothetical protein WJX77_002990 [Trebouxia sp. C0004] diamond 858 136 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
30454289 30454289 PRJNA376117_P_NODE_40273_length_245_cov_0.895349_g39971_i0 PRJNA376117 40273 245 0.895349 2.19360505 Coccomyxa sp. Obi 2315456 Plants Plants 52.4 1.49e-5   NR BDA44296.1 2315456 g39971 i0 44.9 1.73877551020408 69 28 72.2 4 55 231 94 162 BDA44296.1 probable expansin-like protein 3 [Coccomyxa sp. Obi] diamond 426 52.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
30471317 30471317 PRJNA376117_P_NODE_5613_length_572_cov_2.615230_g5315_i0 PRJNA376117 5613 572 2.61523 14.9591156 Eukaryota 2759 Plants Plants 135 6.099999999999999e-33   NR BDA50398.1 2315456 g5315 i0 42.1 4.12237762237762 195 108 99.7 3 572 3 284 478 BDA50398.1 Elongation factor 3 [Coccomyxa sp. Obi] diamond 2358 136 0.992647058823529 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
30548775 30548775 PRJNA376117_P_NODE_6453_length_529_cov_2.109649_g6153_i0 PRJNA376117 6453 529 2.109649 11.16004321 Symbiochloris irregularis 706552 Plants Plants 283 8.519999999999997e-94   NR KAK9805835.1 706552 g6153 i0 79.9 18.7542533081285 174 35 98.7 0 522 1 1 174 KAK9805835.1 hypothetical protein WJX73_005851 [Symbiochloris irregularis] diamond 9921 283 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
30770124 30770124 PRJNA376117_P_NODE_34794_length_250_cov_0.870056_g34492_i0 PRJNA376117 34794 250 0.870056 2.17514 Gonium pectorale 33097 Plants Plants 112 1.29e-26   NR KXZ56375.1 33097 g34492 i0 67.5 4.032 83 27 99.6 0 250 2 412 494 KXZ56375.1 hypothetical protein GPECTOR_1g332 [Gonium pectorale] diamond 1008 112 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
30801470 30801470 PRJNA376117_P_NODE_13414_length_372_cov_2.765886_g13112_i0 PRJNA376117 13414 372 2.765886 10.28909592 Chlamydomonas sp. UWO 241 1653778 Plants Plants 63.5 8.59e-9   NR KAG1679620.1 1653778 g13112 i0 41.2 0.82258064516129 102 53 78.2 3 348 58 752 851 KAG1679620.1 hypothetical protein FOA52_006137 [Chlamydomonas sp. UWO 241] diamond 306 63.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
30833154 30833154 PRJNA376117_P_NODE_26874_length_276_cov_1.517241_g26572_i0 PRJNA376117 26874 276 1.517241 4.18758516 Scenedesmus sp. PABB 2909984 Plants Plants 122 4.85e-33   NR KAF8069680.1 2742167 g26572 i0 68.5 1 92 24 97.8 2 271 2 35 123 KAF8069680.1 RPL17 [Scenedesmus sp. PABB004] diamond 276 122 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
31465598 31465598 PRJNA376117_P_NODE_31476_length_259_cov_1.655914_g31174_i0 PRJNA376117 31476 259 1.655914 4.28881726 Coccomyxa viridis 1274662 Plants Plants 100 8.91e-23   NR CAK0737387.1 1274662 g31174 i0 60 0.926640926640927 80 32 92.7 0 244 5 241 320 CAK0737387.1 hypothetical protein CVIRNUC_000904 [Coccomyxa viridis] diamond 240 100 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
31813300 31813300 PRJNA376117_P_NODE_37877_length_247_cov_1.344828_g37575_i0 PRJNA376117 37877 247 1.344828 3.32172516 Pedinophyceae sp. YPF-7 765719 Plants Plants 43.1 0.0282   NR CAG9465222.1 765719 g37575 i0 33.3 0.801619433198381 66 43 78.9 1 53 247 15 80 CAG9465222.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 198 43.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
31939714 31939714 PRJNA376117_P_NODE_34577_length_250_cov_1.740113_g34275_i0 PRJNA376117 34577 250 1.740113 4.3502825 Coccomyxa viridis 1274662 Plants Plants 74.7 8.3e-14   NR CAK0778924.1 1274662 g34275 i0 52.5 1.776 80 31 96 2 241 2 23 95 CAK0778924.1 hypothetical protein CVIRNUC_004667 [Coccomyxa viridis] diamond 444 74.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
32034792 32034792 PRJNA376117_P_NODE_8798_length_453_cov_2.594737_g8496_i0 PRJNA376117 8798 453 2.594737 11.75415861 [Myrmecia] bisecta 41462 Plants Plants 138 1.84e-38   NR KAK9809863.1 41462 g8496 i0 49 4.12582781456954 145 67 92.7 3 16 435 11 153 KAK9809863.1 hypothetical protein WJX72_000556 [[Myrmecia] bisecta] diamond 1869 138 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
32083487 32083487 PRJNA376117_P_NODE_28318_length_271_cov_1.358586_g28016_i0 PRJNA376117 28318 271 1.358586 3.68176806 Coccomyxa 41891 Plants Plants 99 2.19e-22   NR KAK9918349.1 248742 g28016 i0 55.2 3.85239852398524 87 39 96.3 0 263 3 197 283 KAK9918349.1 hypothetical protein WJX75_003397 [Coccomyxa subellipsoidea] diamond 1044 100 0.99 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;