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contig_metadata

31 rows where bioproject = "PRJNA376117", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 31 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 31 ✖

bioproject 1

  • PRJNA376117 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
400062 400062 PRJNA376117_P_NODE_39341_length_246_cov_0.890173_g39039_i0 PRJNA376117 39341 246 0.890173 2.18982558 Thermoguttaceae bacterium 2691551 Bacteria Bacteria 110 1.3e-19   NTclustered gi|2814788363|emb|OY780964.2| 2691551 g39039 i0 83.065 2.58130081300813 124 18 49 3 2 122 1419012 1418889 MAG: Thermoguttaceae bacterium isolate 5d2646e0-01ad-46f9-a460-09296c79865c genome assembly, chromosome: 1 blastn 635 110 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Thermoguttaceae   Thermoguttaceae bacterium
1073583 1073583 PRJNA376117_P_NODE_11821_length_393_cov_2.990625_g11519_i0 PRJNA376117 11821 393 2.990625 11.75315625 Pirellulaceae 2691357 Bacteria Bacteria 446 1.4799999999999999e-120   NTclustered gi|470485626|ref|NR_076710.1| 125 g11519 i0 87.186 114.068702290076 398 43 100 7 1 393 1131 1525 Pirellula staleyi strain DSM 6068 23S ribosomal RNA gene, complete sequence blastn 44829 448 0.995535714285714 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Pirellula Pirellula staleyi
1674846 1674846 PRJNA376117_P_NODE_8542_length_459_cov_4.556995_g8240_i0 PRJNA376117 8542 459 4.556995 20.91660705 Lignipirellula cremea 2528010 Bacteria Bacteria 597 4.559999999999998e-166   NTclustered gi|1712668320|gb|CP036433.1| 2528010 g8240 i0 90.175 129.56862745098 458 45 99 0 2 459 1144450 1144907 Lignipirellula cremea strain Pla85_3_4 chromosome, complete genome blastn 59472 597 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Lignipirellula Lignipirellula cremea
2950668 2950668 PRJNA376117_P_NODE_39643_length_246_cov_0.890173_g39341_i0 PRJNA376117 39643 246 0.890173 2.18982558 Aureliella helgolandensis 2527968 Bacteria Bacteria 195 3.49e-45   NTclustered gi|1712701923|gb|CP036298.1| 2527968 g39341 i0 84.314 102.837398373984 204 27 82 5 1 202 6998852 6999052 Aureliella helgolandensis strain Q31a chromosome, complete genome blastn 25298 195 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Aureliella Aureliella helgolandensis
8053253 8053253 PRJNA376117_P_NODE_38087_length_247_cov_0.885057_g37785_i0 PRJNA376117 38087 247 0.885057 2.18609079 Planctomyces sp. SH-PL14 1632864 Bacteria Bacteria 73.1 1.71e-8   NTclustered gi|1015434452|gb|CP011270.1| 1632864 g37785 i0 93.75 0.194331983805668 48 3 19 0 165 212 3730605 3730558 Planctomyces sp. SH-PL14, complete genome blastn 48 73.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Planctomyces Planctomyces sp. SH-PL14
14428530 14428530 PRJNA376117_P_NODE_22352_length_292_cov_1.789954_g22050_i0 PRJNA376117 22352 292 1.789954 5.22666568 uncultured Phycisphaerales bacterium 904075 Bacteria Bacteria 339 1.86e-88   NTclustered gi|2874253847|emb|OY969903.1| 904075 g22050 i0 87.838 356.609589041096 296 27 99 7 2 292 1829829 1830120 MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 blastn 104130 339 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     uncultured Phycisphaerales bacterium
15702877 15702877 PRJNA376117_P_NODE_5913_length_555_cov_1.724066_g5614_i0 PRJNA376117 5913 555 1.724066 9.5685663 Bacteria 2 Bacteria Bacteria 194 9.949999999999999e-54   NR OQB82108.1 1852903 g5614 i0 78.8 10.5081081081081 113 24 61.1 0 550 212 823 935 OQB82108.1 MAG: Pyruvate, phosphate dikinase [Planctomycetes bacterium ADurb.Bin126] diamond 5832 194 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetes bacterium ADurb.Bin126
16977286 16977286 PRJNA376117_P_NODE_3274_length_781_cov_3.598870_g2997_i0 PRJNA376117 3274 781 3.59887 28.1071747 Anatilimnocola aggregata 2528021 Bacteria Bacteria 1018 0   NTclustered gi|1712591889|gb|CP036274.1| 2528021 g2997 i0 90.306 123.340588988476 784 66 100 10 1 781 7628963 7628187 Anatilimnocola aggregata strain ETA_A8 chromosome, complete genome blastn 96329 1018 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Anatilimnocola Anatilimnocola aggregata
19525676 19525676 PRJNA376117_P_NODE_24376_length_285_cov_1.089623_g24074_i0 PRJNA376117 24376 285 1.089623 3.10542555 uncultured Phycisphaerales bacterium 904075 Bacteria Bacteria 359 1.39e-94   NTclustered gi|2874253847|emb|OY969903.1| 904075 g24074 i0 89.384 49.5368421052632 292 21 99 9 2 285 1830165 1830454 MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 blastn 14118 359 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     uncultured Phycisphaerales bacterium
19525706 19525706 PRJNA376117_P_NODE_26336_length_278_cov_1.502439_g26034_i0 PRJNA376117 26336 278 1.502439 4.17678042 Tepidisphaeraceae bacterium 2876886 Bacteria Bacteria 176 1.46e-39   NTclustered gi|2874253799|emb|OY969783.1| 2876886 g26034 i0 78.967 4.01079136690648 271 47 96 10 1 266 246585 246850 MAG: Tepidisphaeraceae bacterium isolate MFD04580.bin.c.1 genome assembly, chromosome: 1 blastn 1115 176 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales Tepidisphaeraceae   Tepidisphaeraceae bacterium
22076363 22076363 PRJNA376117_P_NODE_27378_length_274_cov_1.960199_g27076_i0 PRJNA376117 27378 274 1.960199 5.37094526 Phycisphaerales bacterium 2052180 Bacteria Bacteria 176 1.43e-39   NTclustered gi|1958061316|gb|CP064987.1| 2052180 g27076 i0 80.165 54.1204379562044 242 42 87 6 11 249 2593105 2592867 Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome blastn 14829 176 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
22076398 22076398 PRJNA376117_P_NODE_2978_length_828_cov_2.487417_g2711_i0 PRJNA376117 2978 828 2.487417 20.59581276 uncultured Phycisphaerales bacterium 904075 Bacteria Bacteria 1055 0   NTclustered gi|2874253847|emb|OY969903.1| 904075 g2711 i0 89.94 346.566425120773 835 60 99 22 3 828 1831477 1830658 MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 blastn 286957 1055 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     uncultured Phycisphaerales bacterium
24025292 24025292 PRJNA376117_P_NODE_11319_length_401_cov_1.408537_g11017_i0 PRJNA376117 11319 401 1.408537 5.64823337 Phycisphaerae 666505 Bacteria Bacteria 547 4.0199999999999996e-151   NTclustered gi|2874253847|emb|OY969903.1| 904075 g11017 i0 91.294 123.082294264339 402 34 100 1 1 401 1831896 1832297 MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 blastn 49356 547 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     uncultured Phycisphaerales bacterium
27264622 27264622 PRJNA376117_P_NODE_42123_length_243_cov_0.905882_g41821_i0 PRJNA376117 42123 243 0.905882 2.20129326 uncultured Phycisphaerae bacterium 904963 Bacteria Bacteria 43.9 0.0129   NR CAA9396067.1 904963 g41821 i0 39.4 0.814814814814815 66 37 81.5 1 38 235 140 202 CAA9396067.1 MAG: 5,10-methylenetetrahydrofolate reductase, partial [uncultured Phycisphaerae bacterium] diamond 198 43.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       uncultured Phycisphaerae bacterium
27454320 27454320 PRJNA376117_P_NODE_31963_length_257_cov_2.500000_g31661_i0 PRJNA376117 31963 257 2.5 6.425 Planctomycetota bacterium 2026780 Bacteria Bacteria 55.5 1.35e-6   NR RKY17898.1 2026780 g31661 i0 52.1 7.63424124513619 48 23 56 0 1 144 279 326 RKY17898.1 MAG: hypothetical protein DRP63_02935 [Planctomycetota bacterium] diamond 1962 55.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27597672 27597672 PRJNA376117_P_NODE_37684_length_247_cov_2.465517_g37382_i0 PRJNA376117 37684 247 2.465517 6.08982699 Thalassoglobus 2795865 Bacteria Bacteria 44.3 0.0111   NR WP_146512551.1 1938619 g37382 i0 35.7 2.47773279352227 70 35 77.7 2 2 193 85 150 WP_146512551.1 right-handed parallel beta-helix repeat-containing protein [Thalassoglobus neptunius] diamond 612 44.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Thalassoglobus Thalassoglobus neptunius
27896032 27896032 PRJNA376117_P_NODE_18705_length_319_cov_2.727642_g18403_i0 PRJNA376117 18705 319 2.727642 8.70117798 Planctomycetota bacterium 2026780 Bacteria Bacteria 90.5 1.61e-18   NR MSR63205.1 2026780 g18403 i0 44.5 1.03448275862069 110 50 98.7 3 316 2 320 423 MSR63205.1 HYR domain-containing protein [Planctomycetota bacterium] diamond 330 90.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28464611 28464611 PRJNA376117_P_NODE_17986_length_326_cov_1.059289_g17684_i0 PRJNA376117 17986 326 1.059289 3.4532821399999998 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 45.8 0.00838   NR MAD20413.1 2026779 g17684 i0 45.9 0.957055214723926 37 20 34 0 208 98 1521 1557 MAD20413.1 hypothetical protein [Planctomycetaceae bacterium] diamond 312 45.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
28653957 28653957 PRJNA376117_P_NODE_44907_length_236_cov_3.141104_g44605_i0 PRJNA376117 44907 236 3.141104 7.41300544 Planctomyces sp. 37635 Bacteria Bacteria 117 1.07e-29   NR MBX3444802.1 37635 g44605 i0 68 2.89830508474576 75 24 95.3 0 229 5 59 133 MBX3444802.1 alkaline phosphatase family protein [Planctomyces sp.] diamond 684 117 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Planctomyces Planctomyces sp.
28811477 28811477 PRJNA376117_P_NODE_36748_length_248_cov_1.697143_g36446_i0 PRJNA376117 36748 248 1.697143 4.20891464 Planctomycetes bacterium RBG_13_6 2026780 Bacteria Bacteria 60.1 3.09e-8   NR OHB64874.1 1801963 g36446 i0 50 2.09274193548387 62 31 75 0 244 59 353 414 OHB64874.1 MAG: hypothetical protein A2Y76_13230, partial [Planctomycetes bacterium RBG_13_60_9] diamond 519 60.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetes bacterium RBG_13_60_9
28860346 28860346 PRJNA376117_P_NODE_23908_length_286_cov_1.446009_g23606_i0 PRJNA376117 23908 286 1.446009 4.13558574 Pseudomonadati 3379134 Bacteria Bacteria 70.1 1.59e-11   NR HLX60662.1 2026780 g23606 i0 47.6 2.73776223776224 84 41 88.1 2 32 283 2227 2307 HLX60662.1 Ig-like domain-containing protein [Planctomycetota bacterium] diamond 783 70.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28906308 28906308 PRJNA376117_P_NODE_30708_length_262_cov_1.629630_g30406_i0 PRJNA376117 30708 262 1.62963 4.2696306 Tepidisphaeraceae bacterium 2876886 Bacteria Bacteria 131 7e-36   NR HSV13712.1 2876886 g30406 i0 71.8 0.973282442748092 85 24 97.3 0 2 256 162 246 HSV13712.1 hypothetical protein [Tepidisphaeraceae bacterium] diamond 255 131 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales Tepidisphaeraceae   Tepidisphaeraceae bacterium
29033028 29033028 PRJNA376117_P_NODE_25528_length_281_cov_1.110577_g25226_i0 PRJNA376117 25528 281 1.110577 3.12072137 Phycisphaerae bacterium 2026778 Bacteria Bacteria 129 2.24e-32   NR NUQ47707.1 2026778 g25226 i0 61.3 4.9644128113879 93 36 99.3 0 280 2 228 320 NUQ47707.1 aminomethyl-transferring glycine dehydrogenase [Phycisphaerae bacterium] diamond 1395 129 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
29302492 29302492 PRJNA376117_P_NODE_22889_length_290_cov_1.165899_g22587_i0 PRJNA376117 22889 290 1.165899 3.3811071 Pseudomonadati 3379134 Bacteria Bacteria 114 3.06e-27   NR MBT3200446.1 2052180 g22587 i0 56.8 3.96206896551724 95 41 98.3 0 6 290 29 123 MBT3200446.1 L-glutamate gamma-semialdehyde dehydrogenase [Phycisphaerales bacterium] diamond 1149 115 0.991304347826087 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
29474557 29474557 PRJNA376117_P_NODE_27630_length_273_cov_2.185000_g27328_i0 PRJNA376117 27630 273 2.185 5.96505 Planctomycetota bacterium 2026780 Bacteria Bacteria 65.1 6.49e-10   NR MFH1422031.1 2026780 g27328 i0 54.9 1.35164835164835 51 23 56 0 159 7 296 346 MFH1422031.1 hypothetical protein [Planctomycetota bacterium] diamond 369 65.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30123423 30123423 PRJNA376117_P_NODE_30652_length_262_cov_2.021164_g30350_i0 PRJNA376117 30652 262 2.021164 5.29544968 Pseudomonadati 3379134 Bacteria Bacteria 66.6 2.02e-11   NR MCA8923957.1 2026780 g30350 i0 47.6 1.45419847328244 63 33 72.1 0 261 73 95 157 MCA8923957.1 SRPBCC family protein [Planctomycetota bacterium] diamond 381 66.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30313683 30313683 PRJNA376117_P_NODE_38332_length_247_cov_0.885057_g38030_i0 PRJNA376117 38332 247 0.885057 2.18609079 Bacteria 2 Bacteria Bacteria 129 3.32e-33   NR HUU94870.1 2026778 g38030 i0 70.7 3.98380566801619 82 24 99.6 0 247 2 289 370 HUU94870.1 NADP-dependent isocitrate dehydrogenase [Phycisphaerae bacterium] diamond 984 129 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
30896545 30896545 PRJNA376117_P_NODE_29094_length_268_cov_1.579487_g28792_i0 PRJNA376117 29094 268 1.579487 4.23302516 Phycisphaerales bacterium 2052180 Bacteria Bacteria 121 1.29e-29   NR MFN0010758.1 2052180 g28792 i0 70.2 1.83582089552239 84 24 92.9 1 265 17 300 383 MFN0010758.1 alanine--tRNA ligase [Phycisphaerales bacterium] diamond 492 121 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
31022813 31022813 PRJNA376117_P_NODE_39015_length_246_cov_0.890173_g38713_i0 PRJNA376117 39015 246 0.890173 2.18982558 Planctomycetota bacterium 2026780 Bacteria Bacteria 78.6 6.98e-15   NR MDY7011604.1 2026780 g38713 i0 45.9 1.03658536585366 85 41 97.6 1 3 242 225 309 MDY7011604.1 Gfo/Idh/MocA family oxidoreductase [Planctomycetota bacterium] diamond 255 78.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31908185 31908185 PRJNA376117_P_NODE_37717_length_247_cov_1.896552_g37415_i0 PRJNA376117 37717 247 1.896552 4.68448344 Thermoguttaceae bacterium 2691551 Bacteria Bacteria 151 1.38e-40   NR MCL4192849.1 2691551 g37415 i0 98.8 0.995951417004049 82 1 99.6 0 2 247 329 410 MCL4192849.1 hypothetical protein [Thermoguttaceae bacterium] diamond 246 151 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Thermoguttaceae   Thermoguttaceae bacterium
32792770 32792770 PRJNA376117_P_NODE_18400_length_322_cov_1.236948_g18098_i0 PRJNA376117 18400 322 1.236948 3.98297256 Planctomycetota bacterium 2026780 Bacteria Bacteria 68.9 3.67e-11   NR MBU6414059.1 2026780 g18098 i0 48.8 0.801242236024845 86 40 79.2 3 255 1 128 210 MBU6414059.1 choice-of-anchor A family protein [Planctomycetota bacterium] diamond 258 68.9 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;