RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA376117", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA376117 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13153646 13153646 PRJNA376117_P_NODE_2871_length_847_cov_2.381137_g2606_i0 PRJNA376117 2871 847 2.381137 20.16823039 root 1 Root_unresolved Root_unresolved 351 7.62e-111   NR MFC1809264.1 2035772 g2606 i0 61.9 12.9492325855962 281 104 99.5 2 1 843 498 775 MFC1809264.1 pyruvate, phosphate dikinase [Candidatus Omnitrophota bacterium] diamond 10968 352 0.997159090909091 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30471313 30471313 PRJNA376117_P_NODE_27793_length_273_cov_1.195000_g27491_i0 PRJNA376117 27793 273 1.195 3.26235 PVC group 1783257 Bacteria Bacteria 84 6.02e-17   NR MDD5155923.1 2035772 g27491 i0 48.9 5.12087912087912 92 44 97.8 1 2 268 155 246 MDD5155923.1 MoxR family ATPase [Candidatus Omnitrophota bacterium] diamond 1398 84 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;