RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA376117", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA376117 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26916689 26916689 PRJNA376117_P_NODE_21002_length_301_cov_2.912281_g20700_i0 PRJNA376117 21002 301 2.912281 8.76596581 Streblomastix strix 222440 Preaxostyla other_Eukaryota 48.9 3.42e-4   NR KAA6395684.1 222440 g20700 i0 39 0.767441860465116 77 32 74.8 4 2 226 36 99 KAA6395684.1 MAG: hypothetical protein EZS28_008787 [Streblomastix strix] diamond 231 48.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
32730124 32730124 PRJNA376117_P_NODE_20040_length_309_cov_1.190678_g19738_i0 PRJNA376117 20040 309 1.190678 3.67919502 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 50.1 2.19e-4   NR KAJ4462749.1 342808 g19738 i0 36.2 0.669902912621359 69 39 65 2 3 203 27 92 KAJ4462749.1 putative SUMO-activating enzyme subunit uba-2 [Paratrimastix pyriformis] diamond 207 50.1 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;