RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA376117", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA376117 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29443014 29443014 PRJNA376117_P_NODE_30730_length_262_cov_1.619048_g30428_i0 PRJNA376117 30730 262 1.619048 4.24190576 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 52.4 1.83e-5   NR KAG9392665.1 201153 g30428 i0 39.7 0.778625954198473 68 41 77.9 0 254 51 393 460 KAG9392665.1 hypothetical protein J8273_6033 [Carpediemonas membranifera] diamond 204 52.4 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
29917093 29917093 PRJNA376117_P_NODE_17431_length_330_cov_1.875486_g17129_i0 PRJNA376117 17431 330 1.875486 6.1891038 Hexamita inflata 28002 Fornicata other_Eukaryota 58.9 2.15e-7   NR CAK8816796.1 28002 g17129 i0 36.8 1.59090909090909 87 55 79.1 0 330 70 406 492 CAK8816796.1 HINF_023665 [Hexamita inflata] diamond 525 58.9 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;