RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where bioproject = "PRJNA376117" and tax_clade = "Bacteria candidate phyla"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 21 ✖

bioproject 1

  • PRJNA376117 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1674607 1674607 PRJNA376117_P_NODE_32202_length_256_cov_4.333333_g31900_i0 PRJNA376117 32202 256 4.333333 11.09333248 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 344 3.43e-90   NTclustered gi|1958070929|gb|CP064991.1| 2026720 g31900 i0 91.016 38.046875 256 22 100 1 1 256 87069 87323 Candidatus Saccharibacteria bacterium isolate Hirt_18-Q3-R61-65_BAT3C.362_fly chromosome, complete genome blastn 9740 344 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
13153917 13153917 PRJNA376117_P_NODE_6651_length_521_cov_1.026786_g6350_i0 PRJNA376117 6651 521 1.026786 5.34955506 uncultured Methylomirabilota bacterium 991135 Bacteria Bacteria 412 2.0299999999999998e-110   NTclustered gi|2874253892|emb|OY970067.1| 991135 g6350 i0 81.333 297.73320537428 525 82 99 12 5 520 4745606 4746123 MAG: uncultured candidate division NC10 bacterium isolate MFD01231.bin.c.1 genome assembly, chromosome: 1 blastn 155119 412 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         uncultured Methylomirabilota bacterium
15702563 15702563 PRJNA376117_P_NODE_25413_length_281_cov_1.480769_g25111_i0 PRJNA376117 25413 281 1.480769 4.16096089 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 109 2.4e-28   NR MFS8159965.1 2282149 g25111 i0 62.4 0.99288256227758 93 27 90.7 2 17 271 18 110 MFS8159965.1 DnaJ domain-containing protein [Candidatus Roizmanbacteria bacterium] diamond 279 109 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
18251438 18251438 PRJNA376117_P_NODE_24195_length_285_cov_1.452830_g23893_i0 PRJNA376117 24195 285 1.45283 4.1405655 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 158 1.1099999999999998e-47   NR NCQ53910.1 2026720 g23893 i0 93.8 5.89473684210526 80 5 84.2 0 284 45 63 142 NCQ53910.1 ATP-binding cassette domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 1680 158 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
24626134 24626134 PRJNA376117_P_NODE_30240_length_264_cov_1.361257_g29938_i0 PRJNA376117 30240 264 1.361257 3.59371848 Candidatus Nanogingivalaceae bacterium 2725942 Bacteria Bacteria 477 3.359999999999999e-130   NTclustered gi|2070571752|gb|CP072208.2| 2725942 g29938 i0 99.242 90.7348484848485 264 2 100 0 1 264 112401 112664 MAG: Candidatus Nanogingivalaceae bacterium isolate JCVI_27_bin.3 chromosome, complete genome blastn 23954 477 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Nanosyncoccalia Candidatus Nanogingivales Candidatus Nanogingivalaceae   Candidatus Nanogingivalaceae bacterium
27011537 27011537 PRJNA376117_P_NODE_27102_length_275_cov_2.049505_g26800_i0 PRJNA376117 27102 275 2.049505 5.63613875 Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_ 1802133 Bacteria Bacteria 68.9 5.39e-12   NR OGL23173.1 1802133 g26800 i0 38.5 0.992727272727273 91 53 96 1 11 274 74 164 OGL23173.1 MAG: hypothetical protein A2791_05860 [Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_46_30] diamond 273 68.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_46_30
27517269 27517269 PRJNA376117_P_NODE_25963_length_279_cov_1.640777_g25661_i0 PRJNA376117 25963 279 1.640777 4.57776783 Minisyncoccota bacterium 2053589 Bacteria Bacteria 70.5 9.78e-12   NR MEZ0208581.1 2053589 g25661 i0 45.8 0.774193548387097 72 39 77.4 0 252 37 42 113 MEZ0208581.1 reverse transcriptase domain-containing protein [Candidatus Paceibacterota bacterium] diamond 216 70.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28085495 28085495 PRJNA376117_P_NODE_29945_length_265_cov_1.468750_g29643_i0 PRJNA376117 29945 265 1.46875 3.8921875 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 49.3 4.33e-5   NR HYV28701.1 2212470 g29643 i0 38.5 1.84528301886792 52 23 58.9 1 27 182 57 99 HYV28701.1 isoamylase early set domain-containing protein [Candidatus Eiseniibacteriota bacterium] diamond 489 49.3 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
28622486 28622486 PRJNA376117_P_NODE_36187_length_249_cov_0.875000_g35885_i0 PRJNA376117 36187 249 0.875 2.17875 candidate division TM6 bacterium RIFCSPHIGHO2_12_FULL_32_22 1802375 Bacteria Bacteria 53.1 8.49e-6   NR OGB84747.1 1802375 g35885 i0 40.8 4.1566265060241 76 40 90.4 2 244 20 237 308 OGB84747.1 MAG: hypothetical protein A3F66_01140 [candidate division TM6 bacterium RIFCSPHIGHO2_12_FULL_32_22] diamond 1035 53.1 1 Bacteria Bacteria candidate phyla             candidate division TM6 bacterium RIFCSPHIGHO2_12_FULL_32_22
30011859 30011859 PRJNA376117_P_NODE_33071_length_253_cov_1.711111_g32769_i0 PRJNA376117 33071 253 1.711111 4.32911083 Minisyncoccota bacterium 2053589 Bacteria Bacteria 48.1 5.49e-4   NR MEZ0208986.1 2053589 g32769 i0 32.5 0.91304347826087 77 35 74.7 3 241 53 953 1026 MEZ0208986.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 231 48.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30074733 30074733 PRJNA376117_P_NODE_44312_length_241_cov_0.916667_g44010_i0 PRJNA376117 44312 241 0.916667 2.20916747 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 51.6 2.77e-5   NR MBS3788976.1 2306012 g44010 i0 41.3 0.784232365145228 63 32 72.2 3 4 177 298 360 MBS3788976.1 hypothetical protein [Candidatus Bipolaricaulota bacterium] diamond 189 51.6 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
30232843 30232843 PRJNA376117_P_NODE_27172_length_275_cov_1.524752_g26870_i0 PRJNA376117 27172 275 1.524752 4.193068 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 142 7.25e-38   NR MBS1986331.1 2030827 g26870 i0 72.5 6.94909090909091 91 25 99.3 0 2 274 361 451 MBS1986331.1 hypothetical protein [Candidatus Dependentiae bacterium] diamond 1911 142 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
30296526 30296526 PRJNA376117_P_NODE_33332_length_252_cov_1.720670_g33030_i0 PRJNA376117 33332 252 1.72067 4.3360884 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 85.1 5.05e-17   NR HPB31192.1 2107588 g33030 i0 44.4 0.964285714285714 81 45 96.4 0 6 248 666 746 HPB31192.1 NHL repeat-containing protein [Candidatus Sumerlaeota bacterium] diamond 243 85.1 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
30643440 30643440 PRJNA376117_P_NODE_22853_length_290_cov_1.271889_g22551_i0 PRJNA376117 22853 290 1.271889 3.6884781 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 58.2 2.32e-7   NR MDE0013615.1 2026781 g22551 i0 36.3 1.77931034482759 91 57 93.1 1 8 277 56 146 MDE0013615.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 516 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30706712 30706712 PRJNA376117_P_NODE_14174_length_364_cov_1.058419_g13872_i0 PRJNA376117 14174 364 1.058419 3.85264516 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 193 1.99e-57   NR MFA5829999.1 2044595 g13872 i0 70.2 8.96703296703297 121 36 99.7 0 364 2 173 293 MFA5829999.1 argininosuccinate synthase [Candidatus Altimarinota bacterium] diamond 3264 193 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31261101 31261101 PRJNA376117_P_NODE_27835_length_273_cov_1.155000_g27533_i0 PRJNA376117 27835 273 1.155 3.15315 Bacteria 2 Bacteria Bacteria 128 7.48e-33   NR MCF7917878.1 2044595 g27533 i0 72.6 3.69230769230769 84 23 92.3 0 1 252 341 424 MCF7917878.1 argininosuccinate synthase [Candidatus Altimarinota bacterium] diamond 1008 128 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31560465 31560465 PRJNA376117_P_NODE_45376_length_222_cov_4.080537_g45074_i0 PRJNA376117 45376 222 4.080537 9.05879214 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 128 1.7299999999999999e-34   NR RKV91573.1 1917697 g45074 i0 97.3 1 74 2 100 0 222 1 143 216 RKV91573.1 MAG: hypothetical protein D8G53_15320, partial [Candidatus Saccharimonas sp.] diamond 222 128 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
31830199 31830199 PRJNA376117_P_NODE_30437_length_263_cov_1.621053_g30135_i0 PRJNA376117 30437 263 1.621053 4.26336939 Bacillati 1783272 Bacteria Bacteria 131 3.29e-33   NR MCA9341605.1 2026720 g30135 i0 79 4.57414448669202 81 17 92.4 0 21 263 1 81 MCA9341605.1 glycosyltransferase [Candidatus Saccharibacteria bacterium] diamond 1203 131 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32288211 32288211 PRJNA376117_P_NODE_10539_length_414_cov_1.806452_g10237_i0 PRJNA376117 10539 414 1.806452 7.47871128 Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_ 2282149 Bacteria Bacteria 143 3.9e-40   NR OGK23546.1 1802039 g10237 i0 52.2 1.89130434782609 134 64 97.1 0 409 8 54 187 OGK23546.1 MAG: hypothetical protein A3C25_05655 [Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_38_11] diamond 783 143 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_38_11
32446326 32446326 PRJNA376117_P_NODE_44799_length_239_cov_2.644578_g44497_i0 PRJNA376117 44799 239 2.644578 6.32054142 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 84.7 6e-17   NR MBS1988484.1 2030827 g44497 i0 57.7 0.891213389121339 71 30 89.1 0 215 3 3095 3165 MBS1988484.1 hypothetical protein [Candidatus Dependentiae bacterium] diamond 213 84.7 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
32792787 32792787 PRJNA376117_P_NODE_43920_length_241_cov_1.511905_g43618_i0 PRJNA376117 43920 241 1.511905 3.64369105 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 87 8.37e-20   NR QQG50426.1 2026720 g43618 i0 97.9 2.9253112033195 47 1 58.5 0 239 99 86 132 QQG50426.1 MAG: 30S ribosomal protein S9 [Candidatus Saccharibacteria bacterium] diamond 705 87 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;