RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA371613", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Myxococcota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA371613 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26807220 26807220 PRJNA371613_P_NODE_7141_length_172_cov_0.948148_g6965_i0 PRJNA371613 7141 172 0.948148 1.63081456 Bacteria 2 Bacteria Bacteria 101 2.19e-23   NR HEX7479291.1 3034171 g6965 i0 78.6 4.88372093023256 56 12 97.7 0 169 2 141 196 HEX7479291.1 alkaline phosphatase family protein [Polyangiales bacterium] diamond 840 102 0.990196078431373 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
29096065 29096065 PRJNA371613_P_NODE_7968_length_168_cov_0.977099_g7792_i0 PRJNA371613 7968 168 0.977099 1.64152632 Labilithrix sp. 1971228 Bacteria Bacteria 60.8 5.42e-9   NR MBX3208246.1 1971228 g7792 i0 76.9 2.75 39 8 67.9 1 114 1 1 39 MBX3208246.1 SDR family oxidoreductase [Labilithrix sp.] diamond 462 60.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;