RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA371613" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA371613 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11878288 11878288 PRJNA371613_P_NODE_9010_length_163_cov_1.015873_g8834_i0 PRJNA371613 9010 163 1.015873 1.65587299 Halorientalis marina 2931976 Archaea Archaea 163 6.02e-36   NTclustered gi|2225350885|gb|CP095487.1| 2931976 g8834 i0 86.184 4.41104294478528 152 19 92 2 1 150 3232749 3232598 Halorientalis marina strain GDY88 chromosome, complete genome blastn 719 163 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halorientalis Halorientalis marina
31497140 31497140 PRJNA371613_P_NODE_7636_length_170_cov_0.939850_g7460_i0 PRJNA371613 7636 170 0.93985 1.597745 Methanobacteriota archaeon 2026739 Archaea Archaea 108 4.74e-26   NR MCH7661773.1 2026739 g7460 i0 85.7 0.988235294117647 56 8 98.8 0 2 169 284 339 MCH7661773.1 NADH:flavin oxidoreductase [Methanobacteriota archaeon] diamond 168 108 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;