RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA371613", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA371613 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2950196 2950196 PRJNA371613_P_NODE_8323_length_166_cov_0.992248_g8147_i0 PRJNA371613 8323 166 0.992248 1.64713168 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 171 3.68e-38   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g8147 i0 86.452 2.54819277108434 155 21 93 0 12 166 1980 2134 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 423 171 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
19525398 19525398 PRJNA371613_P_NODE_6836_length_174_cov_2.160584_g6660_i0 PRJNA371613 6836 174 2.160584 3.75941616 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 287 3.69e-73   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g6660 i0 96.532 79.0459770114943 173 6 99 0 2 174 393 221 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 13754 287 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;