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contig_metadata

6 rows where bioproject = "PRJNA371613" and tax_clade = "Sar"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA371613 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2950196 2950196 PRJNA371613_P_NODE_8323_length_166_cov_0.992248_g8147_i0 PRJNA371613 8323 166 0.992248 1.64713168 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 171 3.68e-38   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g8147 i0 86.452 2.54819277108434 155 21 93 0 12 166 1980 2134 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 423 171 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
13826921 13826921 PRJNA371613_P_NODE_7131_length_172_cov_0.948148_g6955_i0 PRJNA371613 7131 172 0.948148 1.63081456 Poteriospumella 1117026 SAR_Eukaryotes SAR_Eukaryotes 313 5.989999999999998e-81   NTclustered gi|2295553597|gb|OP378946.1| 1117027 g6955 i0 99.419 62.2093023255814 172 1 100 0 1 172 459 630 Poteriospumella lacustris isolate 1532 large subunit ribosomal RNA gene, partial sequence blastn 10700 313 1 Eukaryota Sar     Chrysophyceae Chromulinales Dinobryaceae Poteriospumella Poteriospumella lacustris
19525398 19525398 PRJNA371613_P_NODE_6836_length_174_cov_2.160584_g6660_i0 PRJNA371613 6836 174 2.160584 3.75941616 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 287 3.69e-73   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g6660 i0 96.532 79.0459770114943 173 6 99 0 2 174 393 221 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 13754 287 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
23351543 23351543 PRJNA371613_P_NODE_7099_length_172_cov_1.422222_g6923_i0 PRJNA371613 7099 172 1.422222 2.44622184 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.001   NTclustered gi|1620167712|ref|XM_028681606.1| 880535 g6923 i0 94.595 0.215116279069767 37 1 21 1 112 147 14964 15000 Plasmodium sp. gorilla clade G2 E3 ubiquitin-protein ligase, putative (PADL01_0825300), partial mRNA blastn 37 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
24025240 24025240 PRJNA371613_P_NODE_7259_length_171_cov_1.910448_g7083_i0 PRJNA371613 7259 171 1.910448 3.26686608 root 1 Root_unresolved Root_unresolved 298 1.67e-76   NTclustered gi|833494852|ref|XM_012915026.1| 5866 g7083 i0 98.246 98.766081871345 171 2 100 1 1 171 135 304 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 16889 300 0.993333333333333 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
31939702 31939702 PRJNA371613_P_NODE_3557_length_276_cov_1.104603_g3381_i0 PRJNA371613 3557 276 1.104603 3.04870428 Cladocopium goreaui 2562237 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0304   NR CAL1169753.1 2562237 g3381 i0 40.5 0.456521739130435 42 25 45.7 0 54 179 948 989 CAL1169753.1 unnamed protein product [Cladocopium goreaui] diamond 126 43.5 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Cladocopium Cladocopium goreaui

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;