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contig_metadata

22 rows where bioproject = "PRJNA358490" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA358490 · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1073206 1073206 PRJNA358490_P_NODE_12321_length_240_cov_1.621891_g11977_i0 PRJNA358490 12321 240 1.621891 3.8925384 root 1 Root_unresolved Root_unresolved 444 3.05e-120   NTclustered gi|166044661|emb|CU367570.1| 100861 g11977 i0 100 99.6083333333333 240 0 100 0 1 240 348 587 Aphanomyces euteiches cDNA blastn 23906 444 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
2348533 2348533 PRJNA358490_P_NODE_10982_length_288_cov_1.670683_g10640_i0 PRJNA358490 10982 288 1.670683 4.81156704 root 1 Root_unresolved Root_unresolved 307 5.15e-79   NTclustered gi|166044469|emb|CU367378.1| 100861 g10640 i0 100 46.6423611111111 166 0 58 0 123 288 69 234 Aphanomyces euteiches cDNA blastn 13433 307 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
2348562 2348562 PRJNA358490_P_NODE_17842_length_154_cov_1.373913_g17498_i0 PRJNA358490 17842 154 1.373913 2.11582602 root 1 Root_unresolved Root_unresolved 233 4.2099999999999994e-57   NTclustered gi|166046493|emb|CU367610.1| 100861 g17498 i0 100 81.4090909090909 126 0 100 0 1 126 458 583 Aphanomyces euteiches cDNA blastn 12537 233 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
3623894 3623894 PRJNA358490_P_NODE_16723_length_163_cov_1.629032_g16379_i0 PRJNA358490 16723 163 1.629032 2.65532216 root 1 Root_unresolved Root_unresolved 292 7.35e-75   NTclustered gi|166046728|emb|CU367838.1| 100861 g16379 i0 100 98.4846625766871 158 0 97 0 6 163 534 691 Aphanomyces euteiches cDNA blastn 16053 292 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
8725854 8725854 PRJNA358490_P_NODE_14807_length_185_cov_1.623288_g14463_i0 PRJNA358490 14807 185 1.623288 3.0030828 root 1 Root_unresolved Root_unresolved 342 8.369999999999999e-90   NTclustered gi|166046493|emb|CU367610.1| 100861 g14463 i0 100 99.9837837837838 185 0 100 0 1 185 177 361 Aphanomyces euteiches cDNA blastn 18497 342 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
8725904 8725904 PRJNA358490_P_NODE_8567_length_409_cov_1.191892_g8226_i0 PRJNA358490 8567 409 1.191892 4.87483828 root 1 Root_unresolved Root_unresolved 239 2.81e-58   NTclustered gi|166046625|emb|CU367742.1| 100861 g8226 i0 100 32.919315403423 129 0 32 0 1 129 249 121 Aphanomyces euteiches cDNA blastn 13464 239 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
10001340 10001340 PRJNA358490_P_NODE_15148_length_180_cov_2.531915_g14804_i0 PRJNA358490 15148 180 2.531915 4.557447 root 1 Root_unresolved Root_unresolved 300 4.94e-77   NTclustered gi|166044558|emb|CU367467.1| 100861 g14804 i0 97.714 96.8055555555556 175 3 97 1 1 175 310 137 Aphanomyces euteiches cDNA blastn 17425 300 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
11276458 11276458 PRJNA358490_P_NODE_4409_length_667_cov_1.511146_g4156_i0 PRJNA358490 4409 667 1.511146 10.07934382 root 1 Root_unresolved Root_unresolved 894 0   NTclustered gi|166046677|emb|CU367787.1| 100861 g4156 i0 99.592 82.3868065967016 490 2 73 0 170 659 798 309 Aphanomyces euteiches cDNA blastn 54952 894 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
13152833 13152833 PRJNA358490_P_NODE_6271_length_529_cov_1.848980_g5948_i0 PRJNA358490 6271 529 1.84898 9.7811042 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 451 4.38e-122   NTclustered gi|166046664|emb|CU367774.1| 100861 g5948 i0 100 82.3724007561437 244 0 46 0 267 510 31 274 Aphanomyces euteiches cDNA blastn 43575 451 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
13826641 13826641 PRJNA358490_P_NODE_7211_length_474_cov_1.025287_g6877_i0 PRJNA358490 7211 474 1.025287 4.85986038 root 1 Root_unresolved Root_unresolved 309 2.48e-79   NTclustered gi|166046702|emb|CU367812.1| 100861 g6877 i0 100 17.5801687763713 167 0 65 0 308 474 550 384 Aphanomyces euteiches cDNA blastn 8333 309 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
16375683 16375683 PRJNA358490_P_NODE_15933_length_171_cov_1.227273_g15589_i0 PRJNA358490 15933 171 1.227273 2.09863683 root 1 Root_unresolved Root_unresolved 316 4.6e-82   NTclustered gi|166046651|emb|CU367768.1| 100861 g15589 i0 100 4 171 0 100 0 1 171 247 417 Aphanomyces euteiches cDNA blastn 684 316 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
16375695 16375695 PRJNA358490_P_NODE_18533_length_150_cov_1.081081_g18189_i0 PRJNA358490 18533 150 1.081081 1.6216215 root 1 Root_unresolved Root_unresolved 278 1.85e-70   NTclustered gi|166046503|emb|CU367620.1| 100861 g18189 i0 100 16.92 150 0 100 0 1 150 414 563 Aphanomyces euteiches cDNA blastn 2538 278 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
16976321 16976321 PRJNA358490_P_NODE_11474_length_269_cov_2.569565_g11130_i0 PRJNA358490 11474 269 2.569565 6.91212985 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 484 2.0499999999999994e-132   NTclustered gi|166046639|emb|CU367756.1| 100861 g11130 i0 100 96.5650557620818 262 0 97 0 8 269 421 160 Aphanomyces euteiches cDNA blastn 25976 484 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
18924676 18924676 PRJNA358490_P_NODE_16415_length_166_cov_1.283465_g16071_i0 PRJNA358490 16415 166 1.283465 2.1305519 root 1 Root_unresolved Root_unresolved 307 2.69e-79   NTclustered gi|166046589|emb|CU367706.1| 100861 g16071 i0 100 123.126506024096 166 0 100 0 1 166 372 537 Aphanomyces euteiches cDNA blastn 20439 307 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
20800514 20800514 PRJNA358490_P_NODE_18517_length_150_cov_1.099099_g18173_i0 PRJNA358490 18517 150 1.099099 1.6486485 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 278 1.85e-70   NTclustered gi|166044497|emb|CU367406.1| 100861 g18173 i0 100 71.5 150 0 100 0 1 150 664 515 Aphanomyces euteiches cDNA blastn 10725 278 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
22750048 22750048 PRJNA358490_P_NODE_16878_length_162_cov_0.983740_g16534_i0 PRJNA358490 16878 162 0.98374 1.5936588 root 1 Root_unresolved Root_unresolved 289 9.44e-74   NTclustered gi|166046470|emb|CU367587.1| 100861 g16534 i0 98.765 94.9012345679012 162 2 100 0 1 162 65 226 Aphanomyces euteiches cDNA blastn 15374 289 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
22750063 22750063 PRJNA358490_P_NODE_4958_length_622_cov_1.331046_g4683_i0 PRJNA358490 4958 622 1.331046 8.27910612 root 1 Root_unresolved Root_unresolved 544 8.35e-150   NTclustered gi|166044635|emb|CU367544.1| 100861 g4683 i0 92.737 49.1382636655949 358 22 58 2 265 622 78 431 Aphanomyces euteiches cDNA blastn 30564 544 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
23351087 23351087 PRJNA358490_P_NODE_8859_length_394_cov_5.509859_g8518_i0 PRJNA358490 8859 394 5.509859 21.70884446 Globisporangium ultimum 2052682 SAR_Eukaryotes SAR_Eukaryotes 667 0   NTclustered gi|299830435|ref|NC_014280.1| 2052682 g8518 i0 99.455 96.1979695431472 367 2 93 0 28 394 9861 9495 Pythium ultimum mitochondrion, complete genome blastn 37902 667 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium ultimum
25299388 25299388 PRJNA358490_P_NODE_16820_length_162_cov_1.674797_g16476_i0 PRJNA358490 16820 162 1.674797 2.71317114 root 1 Root_unresolved Root_unresolved 294 2.03e-75   NTclustered gi|166046611|emb|CU367728.1| 100861 g16476 i0 99.383 95.5246913580247 162 1 100 0 1 162 264 425 Aphanomyces euteiches cDNA blastn 15475 294 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
25299392 25299392 PRJNA358490_P_NODE_17760_length_154_cov_3.426087_g17416_i0 PRJNA358490 17760 154 3.426087 5.27617398 root 1 Root_unresolved Root_unresolved 285 1.14e-72   NTclustered gi|166044558|emb|CU367467.1| 100861 g17416 i0 100 99.8701298701299 154 0 100 0 1 154 308 461 Aphanomyces euteiches cDNA blastn 15380 285 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
28197268 28197268 PRJNA358490_P_NODE_6846_length_493_cov_11.160793_g6515_i0 PRJNA358490 6846 493 11.160793 55.02270949 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 55.5 1.88e-5   NR TMW59321.1 41045 g6515 i0 32.2 4.87423935091278 115 74 70 2 109 453 624 734 TMW59321.1 hypothetical protein Poli38472_004390 [Pythium oligandrum] diamond 2403 55.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29807575 29807575 PRJNA358490_P_NODE_4971_length_620_cov_3.745267_g4696_i0 PRJNA358490 4971 620 3.745267 23.2206554 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 190 1.27e-53   NR KAF1787781.1 29920 g4696 i0 56.4 14.7241935483871 179 72 85.6 2 6 536 379 553 KAF1787781.1 Transglutaminase elicitor [Phytophthora cactorum] diamond 9129 191 0.994764397905759 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;