RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA358490" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA358490 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15701829 15701829 PRJNA358490_P_NODE_8393_length_417_cov_2.322751_g8052_i0 PRJNA358490 8393 417 2.322751 9.68587167 Acropora muricata 159855 Cnidaria other_Eukaryota 60.2 2.4e-4   NTclustered gi|2784670751|ref|XM_067165698.1| 159855 g8052 i0 100 0.613908872901679 32 0 8 0 1 32 3791 3760 PREDICTED: Acropora muricata tyrosine kinase receptor Cad96Ca-like (LOC136892555), transcript variant X2, mRNA blastn 256 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora muricata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;