contig_metadata
50 rows where bioproject = "PRJNA358490" and tax_phylum = "Chordata"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1073269 | 1073269 | PRJNA358490_P_NODE_7661_length_452_cov_3.711864_g7320_i0 | PRJNA358490 | 7661 | 452 | 3.711864 | 16.77762528 | Bos | 9903 | Chordata | Chordata | 774 | 0 | NTclustered | gi|2633866868|ref|XR_009736591.1| | 9906 | g7320 | i0 | 99.074 | 2.86725663716814 | 432 | 3 | 95 | 1 | 1 | 431 | 3573 | 3142 | PREDICTED: Bos javanicus uncharacterized LOC133248008 (LOC133248008), ncRNA | blastn | 1296 | 780 | 0.992307692307692 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 1673656 | 1673656 | PRJNA358490_P_NODE_12922_length_224_cov_1.297297_g12578_i0 | PRJNA358490 | 12922 | 224 | 1.297297 | 2.90594528 | Perognathus longimembris | 38669 | Chordata | Chordata | 63.9 | 9.19e-6 | NTclustered | gi|2240580264|ref|XM_048367258.1| | 214514 | g12578 | i0 | 93.182 | 14.4821428571429 | 44 | 1 | 20 | 2 | 61 | 104 | 213 | 172 | PREDICTED: Perognathus longimembris pacificus solute carrier family 35 member B1 (Slc35b1), transcript variant X1, mRNA | blastn | 3244 | 63.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Heteromyidae | Perognathus | Perognathus longimembris | |
| 1673692 | 1673692 | PRJNA358490_P_NODE_15542_length_175_cov_1.779412_g15198_i0 | PRJNA358490 | 15542 | 175 | 1.779412 | 3.113971 | Canis lupus | 9612 | Chordata | Chordata | 324 | 2.83e-84 | NTclustered | gi|148356345|gb|AC188935.5| | 9615 | g15198 | i0 | 100 | 1 | 175 | 0 | 100 | 0 | 1 | 175 | 71113 | 70939 | Canis familiaris chromosome 27, clone XX-470A24, complete sequence | blastn | 175 | 324 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 2348571 | 2348571 | PRJNA358490_P_NODE_3682_length_745_cov_1.883853_g3458_i0 | PRJNA358490 | 3682 | 745 | 1.883853 | 14.03470485 | root | 1 | Root_unresolved | Root_unresolved | 1338 | 0 | NTclustered | gi|372282852|emb|FO081860.4| | 9823 | g3458 | i0 | 100 | 95.6791946308725 | 724 | 0 | 97 | 0 | 1 | 724 | 26205 | 25482 | Pig DNA sequence from clone WTSI_1061-33H9 on chromosome Y, complete sequence | blastn | 71281 | 1338 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Suidae | Sus | Sus scrofa | |
| 2949559 | 2949559 | PRJNA358490_P_NODE_14643_length_188_cov_1.590604_g14299_i0 | PRJNA358490 | 14643 | 188 | 1.590604 | 2.99033552 | Gallus gallus | 9031 | Chordata | Chordata | 302 | 1.4500000000000001e-77 | NTclustered | gi|2201808918|ref|XM_040674857.2| | 9031 | g14299 | i0 | 98.824 | 27.6755319148936 | 170 | 0 | 89 | 2 | 21 | 188 | 4453 | 4622 | PREDICTED: Gallus gallus eukaryotic translation initiation factor 3 subunit A (EIF3A), mRNA | blastn | 5203 | 302 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 2949599 | 2949599 | PRJNA358490_P_NODE_17603_length_156_cov_1.042735_g17259_i0 | PRJNA358490 | 17603 | 156 | 1.042735 | 1.6266666 | Ovis aries | 9940 | Chordata | Chordata | 267 | 4.2199999999999997e-67 | NTclustered | gi|2606985871|ref|XM_060406732.1| | 9940 | g17259 | i0 | 97.436 | 244.974358974359 | 156 | 4 | 100 | 0 | 1 | 156 | 5818 | 5973 | PREDICTED: Ovis aries EF-hand domain family member B (EFHB), transcript variant X7, mRNA | blastn | 38216 | 267 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Ovis | Ovis aries | |
| 2949723 | 2949723 | PRJNA358490_P_NODE_7763_length_447_cov_3.375000_g7422_i0 | PRJNA358490 | 7763 | 447 | 3.375 | 15.08625 | Rhineura floridana | 261503 | Chordata | Chordata | 52.8 | 0.043 | NTclustered | gi|2636918762|ref|XM_061585785.1| | 261503 | g7422 | i0 | 100 | 0.0626398210290828 | 28 | 0 | 6 | 0 | 5 | 32 | 1529 | 1502 | PREDICTED: Rhineura floridana ADCYAP receptor type I (ADCYAP1R1), mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Lepidosauria | Squamata | Rhineuridae | Rhineura | Rhineura floridana | |
| 4226161 | 4226161 | PRJNA358490_P_NODE_15604_length_174_cov_2.385185_g15260_i0 | PRJNA358490 | 15604 | 174 | 2.385185 | 4.1502219 | Meleagris gallopavo | 9103 | Chordata | Chordata | 220 | 3.79e-53 | NTclustered | gi|2721460824|emb|HG999682.4| | 9103 | g15260 | i0 | 97.656 | 0.735632183908046 | 128 | 3 | 74 | 0 | 1 | 128 | 53907731 | 53907858 | Meleagris gallopavo genome assembly, chromosome: 3 | blastn | 128 | 220 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Meleagris | Meleagris gallopavo | |
| 4226208 | 4226208 | PRJNA358490_P_NODE_2184_length_959_cov_4.408696_g2034_i0 | PRJNA358490 | 2184 | 959 | 4.408696 | 42.27939464 | Gallus gallus | 9031 | Chordata | Chordata | 857 | 0 | NTclustered | gi|2201805256|ref|XR_005850368.2| | 9031 | g2034 | i0 | 98.758 | 28.5151199165798 | 483 | 5 | 98 | 1 | 472 | 954 | 6543 | 7024 | PREDICTED: Gallus gallus uncharacterized LOC107053553 (LOC107053553), ncRNA | blastn | 27346 | 857 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 5502545 | 5502545 | PRJNA358490_P_NODE_12185_length_245_cov_1.582524_g11841_i0 | PRJNA358490 | 12185 | 245 | 1.582524 | 3.8771838 | Gallus gallus | 9031 | Chordata | Chordata | 412 | 8.81e-111 | NTclustered | gi|478486800|ref|NR_102416.1| | 9031 | g11841 | i0 | 99.127 | 58.0081632653061 | 229 | 2 | 93 | 0 | 17 | 245 | 378 | 606 | Gallus gallus ribosomal protein L12 (RPL12), transcript variant 2, non-coding RNA | blastn | 14212 | 412 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 5502661 | 5502661 | PRJNA358490_P_NODE_4145_length_694_cov_1.593893_g3908_i0 | PRJNA358490 | 4145 | 694 | 1.593893 | 11.06161742 | Gallus gallus | 9031 | Chordata | Chordata | 1247 | 0 | NTclustered | gi|2201673256|ref|XM_046905096.1| | 9031 | g3908 | i0 | 100 | 16.2391930835735 | 675 | 0 | 97 | 0 | 20 | 694 | 4285 | 4959 | PREDICTED: Gallus gallus FERM domain containing 8 (FRMD8), transcript variant X4, mRNA | blastn | 11270 | 1247 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 5502739 | 5502739 | PRJNA358490_P_NODE_9965_length_334_cov_3.274576_g9623_i0 | PRJNA358490 | 9965 | 334 | 3.274576 | 10.93708384 | Lampetra planeri | 7750 | Chordata | Chordata | 52.8 | 0.031 | NTclustered | gi|2805721771|emb|OZ078491.1| | 7750 | g9623 | i0 | 100 | 0.0838323353293413 | 28 | 0 | 8 | 0 | 27 | 54 | 14466077 | 14466050 | Lampetra planeri genome assembly, chromosome: 6 | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Hyperoartia | Petromyzontiformes | Petromyzontidae | Lampetra | Lampetra planeri | |
| 6776610 | 6776610 | PRJNA358490_P_NODE_14226_length_195_cov_1.762821_g13882_i0 | PRJNA358490 | 14226 | 195 | 1.762821 | 3.43750095 | Gallus gallus | 9031 | Chordata | Chordata | 318 | 1.5e-82 | NTclustered | gi|238638039|gb|AC232991.2| | 9031 | g13882 | i0 | 99.432 | 22.4717948717949 | 176 | 0 | 90 | 1 | 1 | 175 | 929 | 1104 | Gallus gallus FOSMID clone J_AD-606H7 from chromosome z, complete sequence | blastn | 4382 | 318 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 8052180 | 8052180 | PRJNA358490_P_NODE_11087_length_283_cov_4.045082_g10744_i0 | PRJNA358490 | 11087 | 283 | 4.045082 | 11.44758206 | Pleurodeles waltl | 8319 | Chordata | Chordata | 86.1 | 2.57e-12 | NTclustered | gi|460417121|emb|HE583591.1| | 8319 | g10744 | i0 | 96.226 | 5.91519434628975 | 53 | 0 | 18 | 1 | 232 | 282 | 126 | 74 | Pleurodeles waltl mRNA for DNA polymerase mu (polymerase mu gene) | blastn | 1674 | 86.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Caudata | Salamandridae | Pleurodeles | Pleurodeles waltl | |
| 8052187 | 8052187 | PRJNA358490_P_NODE_11447_length_270_cov_1.779221_g11103_i0 | PRJNA358490 | 11447 | 270 | 1.779221 | 4.8038967 | Mus musculus | 10090 | Chordata | Chordata | 499 | 7.349999999999998e-137 | NTclustered | gi|82779870|gb|AC151288.3| | 10090 | g11103 | i0 | 100 | 107.048148148148 | 270 | 0 | 100 | 0 | 1 | 270 | 79001 | 79270 | Mus musculus BAC clone RP23-340K6 from chromosome 17, complete sequence | blastn | 28903 | 499 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8725886 | 8725886 | PRJNA358490_P_NODE_4207_length_687_cov_15.850309_g3967_i0 | PRJNA358490 | 4207 | 687 | 15.850309 | 108.89162283 | Aves | 8782 | Chordata | Chordata | 928 | 0 | NTclustered | gi|2917595432|emb|OZ228659.1| | 50251 | g3967 | i0 | 92.261 | 17.4075691411936 | 659 | 44 | 95 | 6 | 4 | 656 | 8227673 | 8228330 | Sitta europaea genome assembly, chromosome: 5 | blastn | 11959 | 929 | 0.998923573735199 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Sittidae | Sitta | Sitta europaea | |
| 9327035 | 9327035 | PRJNA358490_P_NODE_10608_length_303_cov_2.159091_g10266_i0 | PRJNA358490 | 10608 | 303 | 2.159091 | 6.54204573 | Gallus gallus | 9031 | Chordata | Chordata | 542 | 1.37e-149 | NTclustered | gi|2201667263|ref|XM_419481.8| | 9031 | g10266 | i0 | 99.662 | 7.58745874587459 | 296 | 1 | 98 | 0 | 8 | 303 | 1341 | 1636 | PREDICTED: Gallus gallus glyoxalase I (GLO1), mRNA | blastn | 2299 | 542 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 10602678 | 10602678 | PRJNA358490_P_NODE_11209_length_279_cov_2.029167_g10865_i0 | PRJNA358490 | 11209 | 279 | 2.029167 | 5.66137593 | Bos taurus | 9913 | Chordata | Chordata | 466 | 7.74e-127 | NTclustered | gi|119216318|gb|AY644517.5| | 9913 | g10865 | i0 | 98.851 | 102.799283154122 | 261 | 3 | 94 | 0 | 1 | 261 | 20263 | 20003 | Bos taurus T cell receptor gamma cluster 1 (TCRG1) gene, complete sequence | blastn | 28681 | 466 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 10602760 | 10602760 | PRJNA358490_P_NODE_16729_length_163_cov_1.564516_g16385_i0 | PRJNA358490 | 16729 | 163 | 1.564516 | 2.55016108 | Sus scrofa | 9823 | Chordata | Chordata | 159 | 7.779999999999998e-35 | NTclustered | gi|345108218|emb|FP565308.14| | 9823 | g16385 | i0 | 86.395 | 101.134969325153 | 147 | 18 | 90 | 2 | 1 | 146 | 197126 | 196981 | Pig DNA sequence from clone CH242-502G15 on chromosome X, complete sequence | blastn | 16485 | 159 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Suidae | Sus | Sus scrofa | |
| 11877628 | 11877628 | PRJNA358490_P_NODE_12130_length_246_cov_2.468599_g11786_i0 | PRJNA358490 | 12130 | 246 | 2.468599 | 6.07275354 | Sus scrofa | 9823 | Chordata | Chordata | 111 | 3.61e-20 | NTclustered | gi|371916284|dbj|AK393565.1| | 9823 | g11786 | i0 | 90.476 | 30.3455284552846 | 84 | 8 | 34 | 0 | 4 | 87 | 694 | 611 | Sus scrofa mRNA, clone: KDN010073A10, expressed in kidney | blastn | 7465 | 111 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Suidae | Sus | Sus scrofa | |
| 11877647 | 11877647 | PRJNA358490_P_NODE_13630_length_206_cov_1.634731_g13286_i0 | PRJNA358490 | 13630 | 206 | 1.634731 | 3.36754586 | Mus musculus | 10090 | Chordata | Chordata | 339 | 1.23e-88 | NTclustered | gi|354788557|gb|JN953058.1| | 10090 | g13286 | i0 | 99.462 | 4.51456310679612 | 186 | 1 | 90 | 0 | 21 | 206 | 13382 | 13197 | Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Nprl3:tm1a(EUCOMM)Wtsi; transgenic | blastn | 930 | 339 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 11877659 | 11877659 | PRJNA358490_P_NODE_14730_length_186_cov_2.346939_g14386_i0 | PRJNA358490 | 14730 | 186 | 2.346939 | 4.36530654 | Vicugna pacos | 30538 | Chordata | Chordata | 91.6 | 3.37e-14 | NTclustered | gi|1777522021|ref|XR_004187582.1| | 30538 | g14386 | i0 | 79.137 | 1.5 | 139 | 24 | 74 | 3 | 1 | 138 | 595 | 729 | PREDICTED: Vicugna pacos uncharacterized LOC116278186 (LOC116278186), ncRNA | blastn | 279 | 91.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Camelidae | Vicugna | Vicugna pacos | |
| 11877824 | 11877824 | PRJNA358490_P_NODE_9890_length_338_cov_3.515050_g9548_i0 | PRJNA358490 | 9890 | 338 | 3.51505 | 11.880869 | Meleagris gallopavo | 9103 | Chordata | Chordata | 516 | 9.41e-142 | NTclustered | gi|2721460824|emb|HG999682.4| | 9103 | g9548 | i0 | 94.864 | 1.88461538461538 | 331 | 15 | 98 | 1 | 8 | 338 | 89809678 | 89810006 | Meleagris gallopavo genome assembly, chromosome: 3 | blastn | 637 | 516 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Meleagris | Meleagris gallopavo | |
| 13152643 | 13152643 | PRJNA358490_P_NODE_11751_length_259_cov_1.113636_g11407_i0 | PRJNA358490 | 11751 | 259 | 1.113636 | 2.88431724 | Gallus gallus | 9031 | Chordata | Chordata | 479 | 9.13e-131 | NTclustered | gi|48958792|gb|AC147596.5| | 9031 | g11407 | i0 | 100 | 1 | 259 | 0 | 100 | 0 | 1 | 259 | 105153 | 105411 | Gallus gallus BAC clone CH261-29A2 from chromosome unknown, complete sequence | blastn | 259 | 479 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 13152846 | 13152846 | PRJNA358490_P_NODE_6971_length_487_cov_1.591518_g6639_i0 | PRJNA358490 | 6971 | 487 | 1.591518 | 7.75069266 | Ovis canadensis | 37174 | Chordata | Chordata | 195 | 7.459999999999999e-45 | NTclustered | gi|2841462213|ref|XM_069562092.1| | 37174 | g6639 | i0 | 93.798 | 0.264887063655031 | 129 | 8 | 26 | 0 | 300 | 428 | 1519 | 1647 | PREDICTED: Ovis canadensis RAD18 E3 ubiquitin protein ligase (RAD18), transcript variant X2, mRNA | blastn | 129 | 195 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Ovis | Ovis canadensis | |
| 13152856 | 13152856 | PRJNA358490_P_NODE_7471_length_461_cov_2.056872_g7136_i0 | PRJNA358490 | 7471 | 461 | 2.056872 | 9.48217992 | Gallus gallus | 9031 | Chordata | Chordata | 808 | 0 | NTclustered | gi|2201799584|ref|XM_046917602.1| | 9031 | g7136 | i0 | 99.773 | 95.9110629067245 | 441 | 0 | 95 | 1 | 1 | 440 | 3532 | 3092 | PREDICTED: Gallus gallus actinin, alpha 1 (ACTN1), transcript variant X2, mRNA | blastn | 44215 | 808 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 13826654 | 13826654 | PRJNA358490_P_NODE_9211_length_375_cov_1.988095_g8870_i0 | PRJNA358490 | 9211 | 375 | 1.988095 | 7.45535625 | Canis | 9611 | Chordata | Chordata | 318 | 3.189999999999999e-82 | NTclustered | gi|1953292690|ref|XM_038686449.1| | 9615 | g8870 | i0 | 98.883 | 16.0853333333333 | 179 | 1 | 48 | 1 | 21 | 199 | 39 | 216 | PREDICTED: Canis lupus familiaris sterile alpha motif domain containing 9 like (SAMD9L), transcript variant X1, mRNA | blastn | 6032 | 318 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 14427695 | 14427695 | PRJNA358490_P_NODE_10692_length_299_cov_2.226923_g10350_i0 | PRJNA358490 | 10692 | 299 | 2.226923 | 6.65849977 | Apteryx mantelli | 2696672 | Chordata | Chordata | 230 | 1.2e-55 | NTclustered | gi|840009955|emb|LK064674.1| | 202946 | g10350 | i0 | 87.019 | 0.695652173913043 | 208 | 21 | 70 | 3 | 20 | 227 | 8523816 | 8524017 | Apteryx australis mantelli genome assembly AptMant0, scaffold scaffold33 | blastn | 208 | 230 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Apterygiformes | Apterygidae | Apteryx | Apteryx mantelli | |
| 15701648 | 15701648 | PRJNA358490_P_NODE_14333_length_193_cov_1.311688_g13989_i0 | PRJNA358490 | 14333 | 193 | 1.311688 | 2.53155784 | Canis lupus | 9612 | Chordata | Chordata | 285 | 1.5099999999999998e-72 | NTclustered | gi|124286928|gb|AC187296.11| | 9615 | g13989 | i0 | 94.595 | 9.42487046632124 | 185 | 8 | 95 | 2 | 1 | 184 | 50459 | 50642 | Canis Familiaris chromosome 37, clone XX-85M13, complete sequence | blastn | 1819 | 285 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 16976338 | 16976338 | PRJNA358490_P_NODE_12834_length_226_cov_1.914439_g12490_i0 | PRJNA358490 | 12834 | 226 | 1.914439 | 4.32663214 | Bos taurus | 9913 | Chordata | Chordata | 370 | 4.89e-98 | NTclustered | gi|2587663353|ref|XR_003032134.2| | 9913 | g12490 | i0 | 98.571 | 2.48672566371681 | 210 | 2 | 92 | 1 | 18 | 226 | 6574 | 6783 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC112443722), ncRNA | blastn | 562 | 370 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 18250608 | 18250608 | PRJNA358490_P_NODE_14595_length_189_cov_1.080000_g14251_i0 | PRJNA358490 | 14595 | 189 | 1.08 | 2.0412 | Gallus gallus | 9031 | Chordata | Chordata | 313 | 6.74e-81 | NTclustered | gi|12381876|dbj|AB046395.1| | 9031 | g14251 | i0 | 100 | 76.1587301587302 | 169 | 0 | 89 | 0 | 1 | 169 | 438 | 270 | Gallus gallus RPL35 mRNA for ribosomal protein L35, complete cds | blastn | 14394 | 313 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 18250693 | 18250693 | PRJNA358490_P_NODE_3615_length_751_cov_6.750000_g3391_i0 | PRJNA358490 | 3615 | 751 | 6.75 | 50.6925 | Bos indicus | 9915 | Chordata | Chordata | 811 | 0 | NTclustered | gi|2878404687|ref|XR_011560723.1| | 9915 | g3391 | i0 | 98.272 | 6.59520639147803 | 463 | 8 | 62 | 0 | 1 | 463 | 667 | 1129 | PREDICTED: Bos indicus uncharacterized lncRNA (LOC139176320), ncRNA | blastn | 4953 | 811 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos indicus | |
| 19524739 | 19524739 | PRJNA358490_P_NODE_10396_length_312_cov_2.498168_g10054_i0 | PRJNA358490 | 10396 | 312 | 2.498168 | 7.79428416 | Sus scrofa | 9823 | Chordata | Chordata | 564 | 3.03e-156 | NTclustered | gi|1191850951|ref|XR_002340214.1| | 9823 | g10054 | i0 | 100 | 0.977564102564103 | 305 | 0 | 98 | 0 | 1 | 305 | 271 | 575 | PREDICTED: Sus scrofa uncharacterized LOC110257509 (LOC110257509), ncRNA | blastn | 305 | 564 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Suidae | Sus | Sus scrofa | |
| 19524761 | 19524761 | PRJNA358490_P_NODE_12196_length_244_cov_3.248780_g11852_i0 | PRJNA358490 | 12196 | 244 | 3.24878 | 7.9270232 | Mus musculus | 10090 | Chordata | Chordata | 392 | 1.14e-104 | NTclustered | gi|51468423|gb|AC138376.11| | 10090 | g11852 | i0 | 98.222 | 103.516393442623 | 225 | 2 | 91 | 2 | 1 | 223 | 127013 | 127237 | Mus musculus chromosome 7, clone RP23-53O7, complete sequence | blastn | 25258 | 392 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 20800550 | 20800550 | PRJNA358490_P_NODE_3837_length_727_cov_15.797965_g3612_i0 | PRJNA358490 | 3837 | 727 | 15.797965 | 114.85120555 | Metazoa | 33208 | Chordata | Chordata | 292 | 1.6299999999999996e-96 | NR | XP_035686142.1 | 7739 | g3612 | i0 | 68 | 7.32462173314993 | 203 | 62 | 83.4 | 2 | 682 | 77 | 47 | 247 | XP_035686142.1 peroxiredoxin-2-like [Branchiostoma floridae] | diamond | 5325 | 292 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Leptocardii | Amphioxiformes | Branchiostomatidae | Branchiostoma | Branchiostoma floridae | |
| 21474904 | 21474904 | PRJNA358490_P_NODE_2377_length_925_cov_3.856659_g2215_i0 | PRJNA358490 | 2377 | 925 | 3.856659 | 35.67409575 | root | 1 | Root_unresolved | Root_unresolved | 1709 | 0 | NTclustered | gi|372282852|emb|FO081860.4| | 9823 | g2215 | i0 | 100 | 23.2075675675676 | 925 | 0 | 100 | 0 | 1 | 925 | 31786 | 32710 | Pig DNA sequence from clone WTSI_1061-33H9 on chromosome Y, complete sequence | blastn | 21467 | 1709 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Suidae | Sus | Sus scrofa | |
| 22750080 | 22750080 | PRJNA358490_P_NODE_8398_length_417_cov_1.727513_g8057_i0 | PRJNA358490 | 8398 | 417 | 1.727513 | 7.20372921 | root | 1 | Root_unresolved | Root_unresolved | 745 | 0 | NTclustered | gi|372282852|emb|FO081860.4| | 9823 | g8057 | i0 | 99.038 | 8.67625899280575 | 416 | 2 | 99 | 2 | 1 | 415 | 23437 | 23851 | Pig DNA sequence from clone WTSI_1061-33H9 on chromosome Y, complete sequence | blastn | 3618 | 750 | 0.993333333333333 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Suidae | Sus | Sus scrofa | |
| 23350928 | 23350928 | PRJNA358490_P_NODE_13779_length_203_cov_1.481707_g13435_i0 | PRJNA358490 | 13779 | 203 | 1.481707 | 3.00786521 | Canis lupus | 9612 | Chordata | Chordata | 375 | 9.24e-100 | NTclustered | gi|190341148|gb|AC188147.18| | 9615 | g13435 | i0 | 100 | 45.3251231527094 | 203 | 0 | 100 | 0 | 1 | 203 | 85624 | 85422 | Canis familiaris chromosome 5, clone XX-293F17, complete sequence | blastn | 9201 | 375 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 23350946 | 23350946 | PRJNA358490_P_NODE_15259_length_179_cov_1.642857_g14915_i0 | PRJNA358490 | 15259 | 179 | 1.642857 | 2.94071403 | Bos indicus | 9915 | Chordata | Chordata | 281 | 1.78e-71 | NTclustered | gi|2878483108|ref|XR_011563954.1| | 9915 | g14915 | i0 | 98.734 | 0.88268156424581 | 158 | 2 | 88 | 0 | 1 | 158 | 12768 | 12611 | PREDICTED: Bos indicus uncharacterized lncRNA (LOC139179639), transcript variant X1, ncRNA | blastn | 158 | 281 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos indicus | |
| 23351099 | 23351099 | PRJNA358490_P_NODE_9879_length_339_cov_1.910000_g9537_i0 | PRJNA358490 | 9879 | 339 | 1.91 | 6.4749 | Gallus gallus | 9031 | Chordata | Chordata | 627 | 4.1799999999999996e-175 | NTclustered | gi|311771658|ref|NM_001198782.1| | 9031 | g9537 | i0 | 100 | 68.5752212389381 | 339 | 0 | 100 | 0 | 1 | 339 | 451 | 113 | Gallus gallus cytochrome c oxidase subunit 7A2 (COX7A2), mRNA; nuclear gene for mitochondrial product | blastn | 23247 | 627 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 24625146 | 24625146 | PRJNA358490_P_NODE_10400_length_312_cov_2.402930_g10058_i0 | PRJNA358490 | 10400 | 312 | 2.40293 | 7.4971416 | Gallus gallus | 9031 | Chordata | Chordata | 540 | 5.11e-149 | NTclustered | gi|2201819347|ref|XM_046923686.1| | 9031 | g10058 | i0 | 100 | 93.5769230769231 | 292 | 0 | 94 | 0 | 21 | 312 | 4682 | 4973 | PREDICTED: Gallus gallus autophagy related 4B cysteine peptidase (ATG4B), transcript variant X1, mRNA | blastn | 29196 | 540 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 24625166 | 24625166 | PRJNA358490_P_NODE_11960_length_251_cov_3.254717_g11616_i0 | PRJNA358490 | 11960 | 251 | 3.254717 | 8.16933967 | Bos indicus | 9915 | Chordata | Chordata | 409 | 1.17e-109 | NTclustered | gi|2878536156|ref|XM_070792096.1| | 9915 | g11616 | i0 | 98.701 | 2.7410358565737 | 231 | 2 | 92 | 1 | 21 | 251 | 43628 | 43857 | PREDICTED: Bos indicus mitochondrial ornithine transporter 2 (LOC109561275), mRNA | blastn | 688 | 409 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos indicus | |
| 24625167 | 24625167 | PRJNA358490_P_NODE_11980_length_251_cov_1.448113_g11636_i0 | PRJNA358490 | 11980 | 251 | 1.448113 | 3.63476363 | Gallus gallus | 9031 | Chordata | Chordata | 464 | 2.47e-126 | NTclustered | gi|2201784821|ref|XM_046914028.1| | 9031 | g11636 | i0 | 100 | 100.003984063745 | 251 | 0 | 100 | 0 | 1 | 251 | 1848 | 1598 | PREDICTED: Gallus gallus cell division cycle 40 (CDC40), transcript variant X1, mRNA | blastn | 25101 | 464 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 24625325 | 24625325 | PRJNA358490_P_NODE_6020_length_543_cov_2.537698_g5703_i0 | PRJNA358490 | 6020 | 543 | 2.537698 | 13.77970014 | Meleagris gallopavo | 9103 | Chordata | Chordata | 719 | 0 | NTclustered | gi|2721460824|emb|HG999682.4| | 9103 | g5703 | i0 | 92.161 | 4.8158379373849 | 523 | 20 | 93 | 2 | 21 | 523 | 53760220 | 53759699 | Meleagris gallopavo genome assembly, chromosome: 3 | blastn | 2615 | 719 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Meleagris | Meleagris gallopavo | |
| 24625327 | 24625327 | PRJNA358490_P_NODE_6080_length_539_cov_4.832000_g5761_i0 | PRJNA358490 | 6080 | 539 | 4.832 | 26.04448 | Meleagris gallopavo | 9103 | Chordata | Chordata | 809 | 0 | NTclustered | gi|2721460824|emb|HG999682.4| | 9103 | g5761 | i0 | 98.073 | 9.94619666048238 | 467 | 6 | 86 | 2 | 37 | 502 | 53934952 | 53934488 | Meleagris gallopavo genome assembly, chromosome: 3 | blastn | 5361 | 809 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Meleagris | Meleagris gallopavo | |
| 24625355 | 24625355 | PRJNA358490_P_NODE_8480_length_412_cov_1566.739946_g8139_i0 | PRJNA358490 | 8480 | 412 | 1566.739946 | 6454.96857752 | Meleagris gallopavo | 9103 | Chordata | Chordata | 449 | 1.2e-121 | NTclustered | gi|2721460947|emb|HG999702.4| | 9103 | g8139 | i0 | 92.236 | 14.5509708737864 | 322 | 17 | 77 | 6 | 1 | 317 | 4511899 | 4512217 | Meleagris gallopavo genome assembly, chromosome: 23 | blastn | 5995 | 449 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Meleagris | Meleagris gallopavo | |
| 25299374 | 25299374 | PRJNA358490_P_NODE_14040_length_198_cov_2.025157_g13696_i0 | PRJNA358490 | 14040 | 198 | 2.025157 | 4.00981086 | Bovidae | 9895 | Chordata | Chordata | 134 | 5.9600000000000006e-27 | NTclustered | gi|2587680999|ref|XM_024990989.2| | 9913 | g13696 | i0 | 100 | 9.81818181818182 | 72 | 0 | 36 | 0 | 9 | 80 | 1480 | 1409 | PREDICTED: Bos taurus collagen type XXVIII alpha 1 chain (COL28A1), transcript variant X2, mRNA | blastn | 1944 | 134 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 25299398 | 25299398 | PRJNA358490_P_NODE_2220_length_952_cov_3.259584_g2064_i0 | PRJNA358490 | 2220 | 952 | 3.259584 | 31.03123968 | root | 1 | Root_unresolved | Root_unresolved | 1724 | 0 | NTclustered | gi|372282852|emb|FO081860.4| | 9823 | g2064 | i0 | 100 | 25.6754201680672 | 933 | 0 | 98 | 0 | 20 | 952 | 29019 | 28087 | Pig DNA sequence from clone WTSI_1061-33H9 on chromosome Y, complete sequence | blastn | 24443 | 1724 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Suidae | Sus | Sus scrofa | |
| 27502934 | 27502934 | PRJNA358490_P_NODE_11623_length_263_cov_2.196429_g11279_i0 | PRJNA358490 | 11623 | 263 | 2.196429 | 5.77660827 | Metazoa | 33208 | Chordata | Chordata | 45.4 | 0.00535 | NR | XP_051782102.1 | 27687 | g11279 | i0 | 55 | 2.45247148288973 | 40 | 18 | 45.6 | 0 | 183 | 64 | 219 | 258 | XP_051782102.1 uncharacterized protein K02A2.6-like [Erpetoichthys calabaricus] | diamond | 645 | 45.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Cladistia | Polypteriformes | Polypteridae | Erpetoichthys | Erpetoichthys calabaricus | |
| 28622458 | 28622458 | PRJNA358490_P_NODE_16707_length_163_cov_1.862903_g16363_i0 | PRJNA358490 | 16707 | 163 | 1.862903 | 3.03653189 | Muntiacus reevesi | 9886 | Chordata | Chordata | 53.1 | 2.13e-6 | NR | KAB0354379.1 | 9886 | g16363 | i0 | 56.1 | 6.47852760736196 | 41 | 18 | 75.5 | 0 | 125 | 3 | 92 | 132 | KAB0354379.1 hypothetical protein FD755_022917 [Muntiacus reevesi] | diamond | 1056 | 53.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Cervidae | Muntiacus | Muntiacus reevesi |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;