contig_metadata
13 rows where bioproject = "PRJNA358490" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1073225 | 1073225 | PRJNA358490_P_NODE_18181_length_152_cov_1.070796_g17837_i0 | PRJNA358490 | 18181 | 152 | 1.070796 | 1.62760992 | Deinococcus | 1298 | Bacteria | Bacteria | 254 | 3.17e-63 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g17837 | i0 | 96.711 | 21.1644736842105 | 152 | 5 | 100 | 0 | 1 | 152 | 2197253 | 2197404 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 3217 | 254 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 2949500 | 2949500 | PRJNA358490_P_NODE_10103_length_327_cov_4.406250_g9761_i0 | PRJNA358490 | 10103 | 327 | 4.40625 | 14.4084375 | Deinococcus sp. QL22 | 2939437 | Bacteria | Bacteria | 525 | 1.5099999999999994e-144 | NTclustered | gi|2238957582|gb|CP097149.1| | 2939437 | g9761 | i0 | 96.815 | 217.409785932722 | 314 | 10 | 96 | 0 | 14 | 327 | 1362530 | 1362217 | Deinococcus sp. QL22 chromosome, complete genome | blastn | 71093 | 525 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. QL22 | ||
| 2949684 | 2949684 | PRJNA358490_P_NODE_5523_length_578_cov_1.636364_g5222_i0 | PRJNA358490 | 5523 | 578 | 1.636364 | 9.45818392 | Deinococcus aquaticus | 328692 | Bacteria | Bacteria | 80.5 | 2.6200000000000003e-10 | NTclustered | gi|2444124408|gb|CP115168.1| | 328692 | g5222 | i0 | 90.164 | 0.105536332179931 | 61 | 6 | 11 | 0 | 110 | 170 | 71934 | 71994 | Deinococcus aquaticus strain PB-314 plasmid pDATS03, complete sequence | blastn | 61 | 80.5 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus | ||
| 4901175 | 4901175 | PRJNA358490_P_NODE_1844_length_1031_cov_3.949597_g1710_i0 | PRJNA358490 | 1844 | 1031 | 3.949597 | 40.72034507 | Deinococcus | 1298 | Bacteria | Bacteria | 1459 | 0 | NTclustered | gi|470478007|ref|NR_076423.1| | 68909 | g1710 | i0 | 93.214 | 199.229873908826 | 1002 | 53 | 96 | 13 | 15 | 1007 | 1630 | 635 | Deinococcus geothermalis plasmid pDGEO01 strain AG-3a 23S ribosomal RNA gene, complete sequence | blastn | 205406 | 1459 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 8052267 | 8052267 | PRJNA358490_P_NODE_18007_length_153_cov_1.052632_g17663_i0 | PRJNA358490 | 18007 | 153 | 1.052632 | 1.61052696 | Deinococcus wulumuqiensis | 980427 | Bacteria | Bacteria | 274 | 2.4599999999999997e-69 | NTclustered | gi|1435319096|gb|CP031163.1| | 980427 | g17663 | i0 | 99.338 | 197.849673202614 | 151 | 1 | 100 | 0 | 1 | 151 | 630513 | 630363 | Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdI, complete sequence | blastn | 30271 | 274 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 8725903 | 8725903 | PRJNA358490_P_NODE_8467_length_413_cov_2.780749_g8126_i0 | PRJNA358490 | 8467 | 413 | 2.780749 | 11.48449337 | Deinococcus | 1298 | Bacteria | Bacteria | 597 | 4.069999999999999e-166 | NTclustered | gi|1028459476|gb|CP011387.1| | 1182568 | g8126 | i0 | 93.366 | 166.261501210654 | 407 | 21 | 98 | 6 | 10 | 413 | 71330 | 70927 | Deinococcus puniceus strain DY1, complete genome | blastn | 68666 | 603 | 0.990049751243781 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus puniceus | ||
| 8725907 | 8725907 | PRJNA358490_P_NODE_8847_length_395_cov_1.516854_g8506_i0 | PRJNA358490 | 8847 | 395 | 1.516854 | 5.9915733 | Deinococcus | 1298 | Bacteria | Bacteria | 616 | 1.0699999999999998e-171 | NTclustered | gi|2155018471|emb|OV024757.1| | 1299 | g8506 | i0 | 96.267 | 20.0177215189873 | 375 | 14 | 95 | 0 | 1 | 375 | 1625099 | 1625473 | Deinococcus radiodurans isolate DRR11 genome assembly, chromosome: 1 | blastn | 7907 | 616 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 15101007 | 15101007 | PRJNA358490_P_NODE_18032_length_152_cov_3.247788_g17688_i0 | PRJNA358490 | 18032 | 152 | 3.247788 | 4.93663776 | Deinococcus | 1298 | Bacteria | Bacteria | 268 | 1.13e-67 | NTclustered | gi|730601855|gb|CP010028.1| | 57497 | g17688 | i0 | 98.675 | 232.263157894737 | 151 | 2 | 99 | 0 | 2 | 152 | 70495 | 70645 | Deinococcus swuensis strain DY59, complete genome | blastn | 35304 | 268 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiopugnans | ||
| 19524740 | 19524740 | PRJNA358490_P_NODE_10436_length_310_cov_3.199262_g10094_i0 | PRJNA358490 | 10436 | 310 | 3.199262 | 9.9177122 | Deinococcus sp. AJ005 | 2652443 | Bacteria | Bacteria | 182 | 3.5399999999999987e-41 | NTclustered | gi|1761809830|gb|CP044990.1| | 2652443 | g10094 | i0 | 80.658 | 1.51290322580645 | 243 | 39 | 77 | 6 | 27 | 265 | 3342614 | 3342852 | Deinococcus sp. AJ005 chromosome, complete genome | blastn | 469 | 182 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. AJ005 | ||
| 20800542 | 20800542 | PRJNA358490_P_NODE_3297_length_787_cov_66.588235_g3085_i0 | PRJNA358490 | 3297 | 787 | 66.588235 | 524.04940945 | Deinococcus yunweiensis | 367282 | Bacteria | Bacteria | 1177 | 0 | NTclustered | gi|2890653062|gb|CP177252.1| | 367282 | g3085 | i0 | 94.517 | 95.4904701397713 | 766 | 36 | 97 | 6 | 5 | 767 | 2654145 | 2654907 | Deinococcus yunweiensis strain KCTC 3955 chromosome, complete genome | blastn | 75151 | 1177 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus yunweiensis | ||
| 21474881 | 21474881 | PRJNA358490_P_NODE_15877_length_171_cov_1.848485_g15533_i0 | PRJNA358490 | 15877 | 171 | 1.848485 | 3.16090935 | Truepera | 332248 | Bacteria | Bacteria | 206 | 1.04e-48 | NTclustered | gi|2573973991|gb|CP133611.1| | 332249 | g15533 | i0 | 94.074 | 52.625730994152 | 135 | 8 | 79 | 0 | 17 | 151 | 2580546 | 2580680 | Truepera radiovictrix strain CIP 108686 chromosome, complete genome | blastn | 8999 | 206 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 21474917 | 21474917 | PRJNA358490_P_NODE_4177_length_691_cov_3.707055_g1710_i1 | PRJNA358490 | 4177 | 691 | 3.707055 | 25.61575005 | Deinococcus | 1298 | Bacteria | Bacteria | 1027 | 0 | NTclustered | gi|470478007|ref|NR_076423.1| | 68909 | g1710 | i1 | 94.478 | 205.141823444284 | 670 | 31 | 97 | 6 | 1 | 667 | 1301 | 635 | Deinococcus geothermalis plasmid pDGEO01 strain AG-3a 23S ribosomal RNA gene, complete sequence | blastn | 141753 | 1027 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 22750030 | 22750030 | PRJNA358490_P_NODE_13758_length_203_cov_2.713415_g13414_i0 | PRJNA358490 | 13758 | 203 | 2.713415 | 5.50823245 | Truepera | 332248 | Bacteria | Bacteria | 300 | 5.72e-77 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g13414 | i0 | 93.532 | 588.187192118227 | 201 | 13 | 99 | 0 | 1 | 201 | 8 | 208 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 119402 | 300 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;