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contig_metadata

20 rows where bioproject = "PRJNA358490", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 20 ✖

tax_kingdom 1

  • Pseudomonadati · 20 ✖

bioproject 1

  • PRJNA358490 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2949538 2949538 PRJNA358490_P_NODE_12883_length_225_cov_1.483871_g12539_i0 PRJNA358490 12883 225 1.483871 3.33870975 Labilithrix luteola 1391654 Bacteria Bacteria 248 2.38e-61   NTclustered gi|913610804|gb|CP012333.1| 1391654 g12539 i0 88.406 430.711111111111 207 23 92 1 1 206 7089168 7088962 Labilithrix luteola strain DSM 27648, complete genome blastn 96910 248 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
4226211 4226211 PRJNA358490_P_NODE_2264_length_943_cov_3.959071_g2104_i0 PRJNA358490 2264 943 3.959071 37.33403953 Archangium gephyra 48 Bacteria Bacteria 268 8.7e-67   NTclustered gi|2809295724|gb|CP102578.1| 48 g2104 i0 78.759 9.53022269353128 419 76 44 13 505 916 8322910 8322498 Archangium gephyra strain SDU49 chromosome, complete genome blastn 8987 268 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium gephyra
6776658 6776658 PRJNA358490_P_NODE_17826_length_154_cov_1.417391_g17482_i0 PRJNA358490 17826 154 1.417391 2.18278214 Corallococcus exercitus 2316736 Bacteria Bacteria 176 7.189999999999999e-40   NTclustered gi|2809270164|gb|CP102577.1| 2316736 g17482 i0 90.299 43.8311688311688 134 13 87 0 5 138 5503452 5503319 Corallococcus exercitus strain SDU142 chromosome, complete genome blastn 6750 176 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus Corallococcus exercitus
14427710 14427710 PRJNA358490_P_NODE_11952_length_252_cov_1.131455_g11608_i0 PRJNA358490 11952 252 1.131455 2.8512666 Polyangia bacterium 3058050 Bacteria Bacteria 150 6.58e-40   NR HEY0707586.1 3058050 g11608 i0 84.3 0.988095238095238 83 13 98.8 0 2 250 123 205 HEY0707586.1 excinuclease ABC subunit UvrA [Polyangia bacterium] diamond 249 150 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
24625326 24625326 PRJNA358490_P_NODE_6040_length_542_cov_2.170974_g5722_i0 PRJNA358490 6040 542 2.170974 11.76667908 Anaeromyxobacter sp. Fw109-5 404589 Bacteria Bacteria 468 4.46e-127   NTclustered gi|152026452|gb|CP000769.1| 404589 g5722 i0 82.505 100.160516605166 543 85 99 9 5 542 1321440 1320903 Anaeromyxobacter sp. Fw109-5, complete genome blastn 54287 468 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter sp. Fw109-5
26631709 26631709 PRJNA358490_P_NODE_12461_length_236_cov_1.228426_g12117_i0 PRJNA358490 12461 236 1.228426 2.89908536 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 143 1.2e-37   NR MBS1118175.1 2026735 g12117 i0 82.1 0.991525423728814 78 14 99.2 0 236 3 266 343 MBS1118175.1 Mannosyl oligosaccharide glucosidase [Deltaproteobacteria bacterium] diamond 234 143 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
26916670 26916670 PRJNA358490_P_NODE_14622_length_188_cov_1.912752_g14278_i0 PRJNA358490 14622 188 1.912752 3.59597376 Pendulispora albinea 2741071 Bacteria Bacteria 95.1 6.230000000000001e-21   NR WP_394828725.1 2741071 g14278 i0 75.8 0.98936170212766 62 15 98.9 0 3 188 85 146 WP_394828725.1 DUF262 domain-containing protein [Pendulispora albinea] diamond 186 95.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora albinea
26948194 26948194 PRJNA358490_P_NODE_5102_length_608_cov_3.007030_g4820_i0 PRJNA358490 5102 608 3.00703 18.2827424 Polyangiaceae bacterium 2268199 Bacteria Bacteria 213 7.76e-65   NR HMJ56734.1 2268199 g4820 i0 55.2 0.902960526315789 183 81 90.3 1 568 20 118 299 HMJ56734.1 hypothetical protein [Polyangiaceae bacterium] diamond 549 213 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27074837 27074837 PRJNA358490_P_NODE_7222_length_473_cov_1.458525_g6888_i0 PRJNA358490 7222 473 1.458525 6.89882325 Myxococcales bacterium 2026763 Bacteria Bacteria 84.3 1.08e-15   NR MES1176617.1 2026763 g6888 i0 87 0.875264270613108 46 6 29.2 0 1 138 381 426 MES1176617.1 phosphoenolpyruvate kinase [Myxococcales bacterium] diamond 414 84.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27169448 27169448 PRJNA358490_P_NODE_16642_length_164_cov_1.288000_g16298_i0 PRJNA358490 16642 164 1.288 2.11232 Polyangiaceae bacterium 2268199 Bacteria Bacteria 84.3 3.27e-19   NR HVJ21037.1 2268199 g16298 i0 68.5 0.98780487804878 54 17 98.8 0 163 2 45 98 HVJ21037.1 hypothetical protein [Polyangiaceae bacterium] diamond 162 84.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27250018 27250018 PRJNA358490_P_NODE_3723_length_741_cov_2.155271_g3498_i0 PRJNA358490 3723 741 2.155271 15.97055811 Bacteria 2 Bacteria Bacteria 185 6.43e-50   NR OJY22933.1 1895795 g3498 i0 44.4 2.22672064777328 275 111 95.1 11 720 16 429 701 OJY22933.1 MAG: hypothetical protein BGO98_33415 [Myxococcales bacterium 68-20] diamond 1650 185 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium 68-20
27422757 27422757 PRJNA358490_P_NODE_6483_length_516_cov_2.844864_g6155_i0 PRJNA358490 6483 516 2.844864 14.67949824 Polyangiaceae bacterium 2268199 Bacteria Bacteria 134 5.19e-35   NR HMI86906.1 2268199 g6155 i0 63.6 0.511627906976744 88 31 50.6 1 494 234 210 297 HMI86906.1 hypothetical protein [Polyangiaceae bacterium] diamond 264 134 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27675354 27675354 PRJNA358490_P_NODE_13284_length_214_cov_1.617143_g12940_i0 PRJNA358490 13284 214 1.617143 3.46068602 Kofleriaceae bacterium 2212474 Bacteria Bacteria 120 2.69e-30   NR MEO8702332.1 2212474 g12940 i0 77.1 0.981308411214953 70 16 98.1 0 212 3 304 373 MEO8702332.1 outer membrane protein transport protein [Kofleriaceae bacterium] diamond 210 120 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
28306596 28306596 PRJNA358490_P_NODE_1346_length_1156_cov_4.679499_g1241_i0 PRJNA358490 1346 1156 4.679499 54.09500844 Myxococcales bacterium 2026763 Bacteria Bacteria 442 3.9399999999999985e-152   NR MBL8743286.1 2026763 g1241 i0 69.6 0.820069204152249 316 95 81.7 1 1071 127 3 318 MBL8743286.1 putative beta-lysine N-acetyltransferase [Myxococcales bacterium] diamond 948 442 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28369649 28369649 PRJNA358490_P_NODE_9066_length_383_cov_2.142442_g8725_i0 PRJNA358490 9066 383 2.142442 8.20555286 Polyangiaceae bacterium 2268199 Bacteria Bacteria 70.9 9.34e-13   NR HMJ56563.1 2268199 g8725 i0 90 0.626631853785901 40 4 31.3 0 140 21 22 61 HMJ56563.1 PilZ domain-containing protein [Polyangiaceae bacterium] diamond 240 70.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29159274 29159274 PRJNA358490_P_NODE_17949_length_153_cov_1.429825_g17605_i0 PRJNA358490 17949 153 1.429825 2.18763225 Sorangiineae bacterium PRO1 2293716 Bacteria Bacteria 45.1 0.00165   NR MCE7888799.1 2293716 g17605 i0 43.2 1.72549019607843 44 25 86.3 0 6 137 645 688 MCE7888799.1 ATP-binding protein [Sorangiineae bacterium PRO1] diamond 264 45.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Sorangiineae bacterium PRO1
30074699 30074699 PRJNA358490_P_NODE_11812_length_257_cov_1.481651_g11468_i0 PRJNA358490 11812 257 1.481651 3.80784307 Kofleriaceae bacterium 2212474 Bacteria Bacteria 91.3 2.82e-19   NR MEO8699164.1 2212474 g11468 i0 85.2 0.630350194552529 54 8 63 0 164 3 327 380 MEO8699164.1 HAMP domain-containing sensor histidine kinase [Kofleriaceae bacterium] diamond 162 91.3 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
31324255 31324255 PRJNA358490_P_NODE_9295_length_370_cov_2.214502_g8953_i0 PRJNA358490 9295 370 2.214502 8.1936574 Bacteria 2 Bacteria Bacteria 113 3.86e-27   NR MBA3819084.1 2026735 g8953 i0 71.8 2.87837837837838 71 20 57.6 0 350 138 73 143 MBA3819084.1 outer membrane protein transport protein [Deltaproteobacteria bacterium] diamond 1065 114 0.991228070175439 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31497130 31497130 PRJNA358490_P_NODE_16856_length_162_cov_1.292683_g16512_i0 PRJNA358490 16856 162 1.292683 2.09414646 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 90.9 1.21e-19   NR MBA2542311.1 2026735 g16512 i0 72.2 1 54 14 98.1 1 161 3 3 56 MBA2542311.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 162 90.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31876397 31876397 PRJNA358490_P_NODE_3457_length_768_cov_2.502058_g3238_i0 PRJNA358490 3457 768 2.502058 19.21580544 Kofleriaceae bacterium 2212474 Bacteria Bacteria 178 2.86e-53   NR HUS66869.1 2212474 g3238 i0 76.5 1.3984375 119 28 46.5 0 259 615 1 119 HUS66869.1 glutaredoxin domain-containing protein [Kofleriaceae bacterium] diamond 1074 178 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;