RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA358490", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA358490 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1673718 1673718 PRJNA358490_P_NODE_17982_length_153_cov_1.359649_g17638_i0 PRJNA358490 17982 153 1.359649 2.08026297 Amphimedon queenslandica 400682 Porifera other_Eukaryota 63.9 5.79e-6   NTclustered gi|761911824|ref|XM_011406869.1| 400682 g17638 i0 97.368 0.248366013071895 38 0 25 1 85 122 877 913 PREDICTED: Amphimedon queenslandica translocase of chloroplast 33, chloroplastic-like (LOC105313433), mRNA blastn 38 63.9 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica
18250663 18250663 PRJNA358490_P_NODE_1895_length_1017_cov_4.317996_g1757_i0 PRJNA358490 1895 1017 4.317996 43.91401932 Opisthokonta 33154 Porifera other_Eukaryota 335 4.72e-100   NR XP_062522961.1 121492 g1757 i0 67 3.42772861356932 233 75 68.7 2 22 720 2117 2347 XP_062522961.1 pre-mRNA-processing-splicing factor 8 [Corticium candelabrum] diamond 3486 335 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;