RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA358490", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 6 ✖

tax_kingdom 1

  • Bacillati · 6 ✖

bioproject 1

  • PRJNA358490 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10602785 10602785 PRJNA358490_P_NODE_2209_length_954_cov_2.298361_g2054_i0 PRJNA358490 2209 954 2.298361 21.92636394 root 1 Root_unresolved Root_unresolved 100 7.2e-20   NR MBM3464575.1 2033014 g2054 i0 30.6 2.26415094339623 235 56 73.9 2 245 949 109 236 MBM3464575.1 serine/threonine protein kinase [Armatimonadota bacterium] diamond 2160 100 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
15101006 15101006 PRJNA358490_P_NODE_18012_length_153_cov_1.052632_g17668_i0 PRJNA358490 18012 153 1.052632 1.61052696 Fimbriimonas 1005038 Bacteria Bacteria 198 1.5199999999999999e-46   NTclustered gi|663071213|gb|CP007139.1| 661478 g17668 i0 92.754 27.2614379084967 138 9 90 1 11 148 29105 28969 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 4171 198 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
22750020 22750020 PRJNA358490_P_NODE_11778_length_258_cov_1.292237_g11434_i0 PRJNA358490 11778 258 1.292237 3.33397146 Fimbriimonas 1005038 Bacteria Bacteria 326 1.25e-84   NTclustered gi|663071213|gb|CP007139.1| 661478 g11434 i0 91.561 194.848837209302 237 18 92 1 1 237 28625 28391 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 50271 326 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
28306605 28306605 PRJNA358490_P_NODE_8646_length_405_cov_1.338798_g8305_i0 PRJNA358490 8646 405 1.338798 5.4221319 Armatimonadota bacterium 2033014 Bacteria Bacteria 45.4 0.019   NR MEI7577238.1 2033014 g8305 i0 48.9 0.348148148148148 47 23 34.8 1 236 376 151 196 MEI7577238.1 hypothetical protein [Armatimonadota bacterium] diamond 141 45.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29334070 29334070 PRJNA358490_P_NODE_11849_length_255_cov_1.319444_g11505_i0 PRJNA358490 11849 255 1.319444 3.3645822 Fimbriimonas 1005038 Bacteria Bacteria 119 3.78e-29   NR HWD39962.1 1936159 g11505 i0 68.3 3.84705882352941 82 26 96.5 0 255 10 770 851 HWD39962.1 ATP-dependent chaperone ClpB [Fimbriimonas sp.] diamond 981 120 0.991666666666667 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
32224694 32224694 PRJNA358490_P_NODE_3818_length_729_cov_6.708696_g3593_i0 PRJNA358490 3818 729 6.708696 48.90639384 Armatimonadota bacterium 2033014 Bacteria Bacteria 129 3.2599999999999992e-31   NR MFN3653247.1 2033014 g3593 i0 41.5 0.724279835390947 176 98 72 2 701 177 231 402 MFN3653247.1 hypothetical protein [Armatimonadota bacterium] diamond 528 129 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;