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contig_metadata

23 rows where bioproject = "PRJNA358490", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 23 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 23 ✖

bioproject 1

  • PRJNA358490 · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2949643 2949643 PRJNA358490_P_NODE_3303_length_787_cov_3.122995_g3090_i0 PRJNA358490 3303 787 3.122995 24.57797065 Sulfuriroseicoccus oceanibius 2707525 Bacteria Bacteria 462 3.08e-125   NTclustered gi|1953472588|gb|CP066776.1| 2707525 g3090 i0 89.037 94.9097839898348 374 39 87 2 415 787 632231 631859 Sulfuriroseicoccus oceanibius strain T37 chromosome, complete genome blastn 74694 462 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Sulfuriroseicoccus Sulfuriroseicoccus oceanibius
6776647 6776647 PRJNA358490_P_NODE_17186_length_159_cov_1.500000_g16842_i0 PRJNA358490 17186 159 1.5 2.385 Luteolibacter sp. Populi 3230487 Bacteria Bacteria 196 5.75e-46   NTclustered gi|2774618348|gb|CP161812.1| 3230487 g16842 i0 90.066 421.987421383648 151 15 95 0 2 152 3261583 3261433 Luteolibacter sp. Populi chromosome, complete genome blastn 67096 196 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. Populi
8052323 8052323 PRJNA358490_P_NODE_4227_length_686_cov_1.944359_g3986_i0 PRJNA358490 4227 686 1.944359 13.33830274 Luteolibacter yonseiensis 1144680 Bacteria Bacteria 395 4.65e-137   NR WP_200352398.1 1144680 g3986 i0 87.3 0.966472303206997 221 28 96.6 0 684 22 17 237 WP_200352398.1 triose-phosphate isomerase [Luteolibacter yonseiensis] diamond 663 395 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter yonseiensis
10602780 10602780 PRJNA358490_P_NODE_1929_length_1010_cov_2.929969_g1789_i0 PRJNA358490 1929 1010 2.929969 29.5926869 Luteolibacter sp. LG18 2819286 Bacteria Bacteria 686 0   NTclustered gi|2585939279|dbj|AP024600.1| 2819286 g1789 i0 79.3 3.74257425742574 1000 191 98 13 22 1010 110019 109025 Luteolibacter sp. LG18 DNA, complete genome blastn 3780 686 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. LG18
11877682 11877682 PRJNA358490_P_NODE_16090_length_169_cov_1.569231_g15746_i0 PRJNA358490 16090 169 1.569231 2.65200039 Haloferula helveola 490095 Bacteria Bacteria 91.6 2.99e-14   NTclustered gi|2647781590|dbj|AP024702.1| 490095 g15746 i0 83.505 1.63313609467456 97 16 57 0 5 101 2179358 2179454 Haloferula helveola CN-1 DNA, complete genome blastn 276 91.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Haloferula Haloferula helveola
13826593 13826593 PRJNA358490_P_NODE_13411_length_211_cov_1.401163_g13067_i0 PRJNA358490 13411 211 1.401163 2.95645393 Luteolibacter 518753 Bacteria Bacteria 133 6.669999999999999e-37   NR HEX7261068.1 1962973 g13067 i0 98.6 8.90047393364929 70 1 99.5 0 2 211 14 83 HEX7261068.1 metal ABC transporter permease [Luteolibacter sp.] diamond 1878 133 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp.
15701649 15701649 PRJNA358490_P_NODE_1433_length_1130_cov_16.079743_g1319_i0 PRJNA358490 1433 1130 16.079743 181.7010959 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 1295 0   NTclustered gi|2874253793|emb|OY969777.1| 412056 g1319 i0 90.622 321.958407079646 981 84 87 5 153 1130 2364712 2365687 MAG: uncultured Verrucomicrobiae bacterium isolate MFD01689.bin.c.1 genome assembly, chromosome: 1 blastn 363813 1295 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
16976446 16976446 PRJNA358490_P_NODE_3294_length_788_cov_4.217623_g3083_i0 PRJNA358490 3294 788 4.217623 33.23486924 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 708 0   NTclustered gi|2874253793|emb|OY969777.1| 412056 g3083 i0 86.76 263.121827411167 642 77 81 8 146 783 2364708 2365345 MAG: uncultured Verrucomicrobiae bacterium isolate MFD01689.bin.c.1 genome assembly, chromosome: 1 blastn 207340 708 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
23351010 23351010 PRJNA358490_P_NODE_3079_length_816_cov_2.694981_g2874_i0 PRJNA358490 3079 816 2.694981 21.99104496 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 488 3.509999999999999e-168   NR MES2920318.1 2026799 g2874 i0 88.5 1.91544117647059 260 30 95.6 0 27 806 221 480 MES2920318.1 putative porin [Verrucomicrobiota bacterium] diamond 1563 488 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
24625234 24625234 PRJNA358490_P_NODE_16860_length_162_cov_1.268293_g16516_i0 PRJNA358490 16860 162 1.268293 2.05463466 Luteolibacter sp. LG18 2819286 Bacteria Bacteria 163 5.97e-36   NTclustered gi|2585939279|dbj|AP024600.1| 2819286 g16516 i0 85 74.8333333333333 160 24 99 0 1 160 5179506 5179347 Luteolibacter sp. LG18 DNA, complete genome blastn 12123 163 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. LG18
26648617 26648617 PRJNA358490_P_NODE_2701_length_870_cov_3.336943_g2516_i0 PRJNA358490 2701 870 3.336943 29.0314041 Luteolibacter 518753 Bacteria Bacteria 214 5.600000000000001e-59   NR MEI7910059.1 2026799 g2516 i0 47.6 2.0551724137931 294 129 95.5 6 870 40 535 820 MEI7910059.1 autotransporter-associated beta strand repeat-containing protein [Verrucomicrobiota bacterium] diamond 1788 214 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27959234 27959234 PRJNA358490_P_NODE_15605_length_174_cov_2.377778_g15261_i0 PRJNA358490 15605 174 2.377778 4.13733372 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 87.4 2.47e-18   NR HWB03578.1 2026801 g15261 i0 71.9 0.982758620689655 57 16 98.3 0 172 2 386 442 HWB03578.1 cytochrome c oxidase subunit 3 [Verrucomicrobiales bacterium] diamond 171 87.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
28527828 28527828 PRJNA358490_P_NODE_15547_length_175_cov_1.529412_g15203_i0 PRJNA358490 15547 175 1.529412 2.676471 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 72.4 5.24e-13   NR MEI7910059.1 2026799 g15203 i0 60.3 0.994285714285714 58 23 99.4 0 175 2 470 527 MEI7910059.1 autotransporter-associated beta strand repeat-containing protein [Verrucomicrobiota bacterium] diamond 174 72.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28874886 28874886 PRJNA358490_P_NODE_18328_length_151_cov_1.151786_g17984_i0 PRJNA358490 18328 151 1.151786 1.73919686 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 86.3 1.22e-18   NR MES2921678.1 2026799 g17984 i0 98 1.98675496688742 50 1 99.3 0 2 151 100 149 MES2921678.1 metal ABC transporter permease [Verrucomicrobiota bacterium] diamond 300 86.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29113134 29113134 PRJNA358490_P_NODE_7968_length_437_cov_1.545226_g7627_i0 PRJNA358490 7968 437 1.545226 6.75263762 Pseudomonadati 3379134 Bacteria Bacteria 80.9 8.06e-15   NR WP_146853078.1 748831 g7627 i0 79.1 1.05720823798627 43 9 29.5 0 375 247 27 69 WP_146853078.1 sialidase family protein [Brevifollis gellanilyticus] diamond 462 80.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Brevifollis Brevifollis gellanilyticus
29380089 29380089 PRJNA358490_P_NODE_10609_length_303_cov_2.132576_g10267_i0 PRJNA358490 10609 303 2.132576 6.46170528 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 119 2.4199999999999998e-32   NR RFC50620.1 2026799 g10267 i0 71.4 1.8019801980198 91 22 90.1 2 274 2 3 89 RFC50620.1 MAG: Cytochrome C oxidase subunit IV [Verrucomicrobiota bacterium] diamond 546 119 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29695479 29695479 PRJNA358490_P_NODE_10310_length_317_cov_1.273381_g9968_i0 PRJNA358490 10310 317 1.273381 4.03661777 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 197 1.49e-57   NR MES2922912.1 2026799 g9968 i0 91.4 0.993690851735016 105 9 99.4 0 317 3 348 452 MES2922912.1 AI-2E family transporter [Verrucomicrobiota bacterium] diamond 315 197 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29980095 29980095 PRJNA358490_P_NODE_3471_length_766_cov_3.220083_g3252_i0 PRJNA358490 3471 766 3.220083 24.66583578 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 288 4.36e-93   NR MES2924107.1 2026799 g3252 i0 88.9 0.634464751958224 162 17 63.4 1 260 745 3 163 MES2924107.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 486 288 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29980096 29980096 PRJNA358490_P_NODE_4751_length_639_cov_1.436667_g4480_i0 PRJNA358490 4751 639 1.436667 9.18030213 Luteolibacter sp. 1962973 Bacteria Bacteria 98.2 9.83e-20   NR MEO5713535.1 1962973 g4480 i0 58 2.17840375586854 88 37 41.3 0 85 348 20 107 MEO5713535.1 leucine-rich repeat domain-containing protein [Luteolibacter sp.] diamond 1392 98.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp.
31261091 31261091 PRJNA358490_P_NODE_13875_length_201_cov_1.512346_g13531_i0 PRJNA358490 13875 201 1.512346 3.03981546 Pseudomonadati 3379134 Bacteria Bacteria 130 2.78e-33   NR HEX2861055.1 1961806 g13531 i0 89.4 4.92537313432836 66 7 98.5 0 3 200 557 622 HEX2861055.1 ABC transporter permease [Lacunisphaera sp.] diamond 990 130 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera sp.
31767060 31767060 PRJNA358490_P_NODE_6677_length_505_cov_2.175966_g6347_i0 PRJNA358490 6677 505 2.175966 10.9886283 Luteolibacter 518753 Bacteria Bacteria 304 7.599999999999999e-102   NR HEX7262126.1 1962973 g6347 i0 83.2 4.96039603960396 167 28 99.2 0 3 503 62 228 HEX7262126.1 MYG1 family protein [Luteolibacter sp.] diamond 2505 304 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp.
31876394 31876394 PRJNA358490_P_NODE_11457_length_270_cov_1.233766_g11113_i0 PRJNA358490 11457 270 1.233766 3.3311682 Verrucomicrobia bacterium LW23 2161867 Bacteria Bacteria 127 4.55e-35   NR PTX92056.1 2161867 g11113 i0 69.7 4.11111111111111 99 19 97.8 2 269 6 85 183 PTX92056.1 hypothetical protein DB346_24215 [Verrucomicrobia bacterium LW23] diamond 1110 127 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobia bacterium LW23
32224693 32224693 PRJNA358490_P_NODE_3018_length_826_cov_2.880559_g2816_i0 PRJNA358490 3018 826 2.880559 23.79341734 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 451 3.409999999999999e-143   NR MES2923304.1 2026799 g2816 i0 88.3 0.966101694915254 266 31 96.6 0 19 816 1126 1391 MES2923304.1 glycoside hydrolase family 98 domain-containing protein [Verrucomicrobiota bacterium] diamond 798 451 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;