RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA358490", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJNA358490 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16375732 16375732 PRJNA358490_P_NODE_9773_length_344_cov_3.537705_g9431_i0 PRJNA358490 9773 344 3.537705 12.1697052 Isochrysidales 73020 Haptophyta other_Eukaryota 608 1.5399999999999993e-169   NTclustered gi|2530650642|gb|ON844104.1| 2903 g9431 i0 98.547 156.020348837209 344 5 100 0 1 344 88710 88367 Emiliania huxleyi strain CS-369 plastid, complete genome blastn 53671 608 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
31054613 31054613 PRJNA358490_P_NODE_8835_length_395_cov_2.258427_g8494_i0 PRJNA358490 8835 395 2.258427 8.92078665 Emiliania huxleyi CCMP1516 280463 Haptophyta other_Eukaryota 93.2 1.3400000000000002e-21   NR XP_005782836.1 280463 g8494 i0 51 6.2506329113924 102 46 76.7 2 343 41 16 114 XP_005782836.1 hypothetical protein EMIHUDRAFT_442529 [Emiliania huxleyi CCMP1516] diamond 2469 93.2 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;