RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA358490", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA358490 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29348628 29348628 PRJNA358490_P_NODE_15409_length_177_cov_1.478261_g15065_i0 PRJNA358490 15409 177 1.478261 2.61652197 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 78.2 1.25e-15   NR MCW9066124.1 2651163 g15065 i0 61.8 2.79661016949153 55 21 93.2 0 165 1 18 72 MCW9066124.1 hypothetical protein [Ignavibacteriaceae bacterium] diamond 495 78.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
31148675 31148675 PRJNA358490_P_NODE_16735_length_163_cov_1.322581_g16391_i0 PRJNA358490 16735 163 1.322581 2.15580703 Ignavibacteria bacterium 2053306 Bacteria Bacteria 64.7 2.27e-10   NR MDP2362921.1 2053306 g16391 i0 68.5 0.993865030674847 54 17 99.4 0 163 2 372 425 MDP2362921.1 hypothetical protein [Ignavibacteria bacterium] diamond 162 64.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32824518 32824518 PRJNA358490_P_NODE_11680_length_261_cov_2.058559_g11336_i0 PRJNA358490 11680 261 2.058559 5.37283899 Ignavibacteria bacterium 2053306 Bacteria Bacteria 125 6.440000000000001e-33   NR MBN8568693.1 2053306 g11336 i0 78.3 0.954022988505747 83 15 92 1 241 2 183 265 MBN8568693.1 LysM peptidoglycan-binding domain-containing protein [Ignavibacteria bacterium] diamond 249 125 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;