RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA358490", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA358490 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26726294 26726294 PRJNA358490_P_NODE_7181_length_475_cov_1.756881_g6847_i0 PRJNA358490 7181 475 1.756881 8.34518475 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 122 3.96e-29   NR HJY83301.1 2838779 g6847 i0 77.5 0.448421052631579 71 16 44.8 0 2 214 396 466 HJY83301.1 group II intron reverse transcriptase/maturase [Candidatus Binatia bacterium] diamond 213 122 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29727135 29727135 PRJNA358490_P_NODE_4870_length_629_cov_1.569492_g4596_i0 PRJNA358490 4870 629 1.569492 9.87210468 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 82 4.44e-16   NR HEY2773387.1 2838779 g4596 i0 54.2 0.343402225755167 72 31 34.3 1 28 243 59 128 HEY2773387.1 diguanylate cyclase [Candidatus Binatia bacterium] diamond 216 82 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;