RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA358209", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Preplasmiviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA358209 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1073183 1073183 PRJNA358209_P_NODE_201_length_224_cov_3.194286_g199_i0 PRJNA358209 201 224 3.194286 7.15520064 root 1 Root_unresolved Root_unresolved 388 1.34e-103   NTclustered gi|2620236085|gb|OR777220.1| 10515 g199 i0 98.636 98.2366071428571 220 1 98 2 1 219 15048 14830 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 22005 388 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
3623850 3623850 PRJNA358209_P_NODE_143_length_254_cov_4.682927_g141_i0 PRJNA358209 143 254 4.682927 11.89463458 root 1 Root_unresolved Root_unresolved 279 9.72e-71   NTclustered gi|2620236085|gb|OR777220.1| 10515 g141 i0 91.96 79.6771653543307 199 16 95 0 56 254 15223 15025 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 20238 279 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
15100949 15100949 PRJNA358209_P_NODE_232_length_211_cov_3.006173_g230_i0 PRJNA358209 232 211 3.006173 6.34302503 root 1 Root_unresolved Root_unresolved 231 2.22e-56   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g230 i0 93.59 92.5876777251185 156 3 93 1 1 156 28638 28490 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 19536 231 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
24024911 24024911 PRJNA358209_P_NODE_259_length_204_cov_4.638710_g257_i0 PRJNA358209 259 204 4.63871 9.4629684 root 1 Root_unresolved Root_unresolved 267 5.839999999999999e-67   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g257 i0 100 70.5882352941177 144 0 71 0 6 149 11379 11236 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 14400 267 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;