contig_metadata
72 rows where bioproject = "PRJNA358209" and tax_kingdom = "Pseudomonadati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 398926 | 398926 | PRJNA358209_P_NODE_641_length_166_cov_0.871795_g639_i0 | PRJNA358209 | 641 | 166 | 0.871795 | 1.4471797 | Paraburkholderia fungorum | 134537 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|2263177777|gb|CP099647.1| | 134537 | g639 | i0 | 100 | 7 | 166 | 0 | 100 | 0 | 1 | 166 | 4607218 | 4607053 | Paraburkholderia fungorum strain OTU2SAUBB1 chromosome 1, complete sequence | blastn | 1162 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia fungorum | ||
| 1073181 | 1073181 | PRJNA358209_P_NODE_1141_length_161_cov_1.562500_g1139_i0 | PRJNA358209 | 1141 | 161 | 1.5625 | 2.515625 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 281 | 1.57e-71 | NTclustered | gi|2798691846|gb|CP166923.2| | 301 | g1139 | i0 | 98.137 | 26.7391304347826 | 161 | 3 | 100 | 0 | 1 | 161 | 223153 | 223313 | Ectopseudomonas oleovorans strain ERA chromosome, complete genome | blastn | 4305 | 281 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas oleovorans | ||
| 1073186 | 1073186 | PRJNA358209_P_NODE_361_length_182_cov_1.533835_g359_i0 | PRJNA358209 | 361 | 182 | 1.533835 | 2.7915797 | Escherichia | 561 | Bacteria | Bacteria | 337 | 3.82e-88 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g359 | i0 | 100 | 100 | 182 | 0 | 100 | 0 | 1 | 182 | 2778646 | 2778465 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 18200 | 337 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 2348520 | 2348520 | PRJNA358209_P_NODE_1022_length_162_cov_0.902655_g1020_i0 | PRJNA358209 | 1022 | 162 | 0.902655 | 1.4623011 | Escherichia | 561 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g1020 | i0 | 100 | 100 | 162 | 0 | 100 | 0 | 1 | 162 | 1588706 | 1588545 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 16200 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 2348523 | 2348523 | PRJNA358209_P_NODE_462_length_167_cov_0.864407_g460_i0 | PRJNA358209 | 462 | 167 | 0.864407 | 1.44355969 | Stenotrophomonas | 40323 | Bacteria | Bacteria | 309 | 7.53e-80 | NTclustered | gi|2235474145|gb|CP080573.1| | 40324 | g460 | i0 | 100 | 100 | 167 | 0 | 100 | 0 | 1 | 167 | 3905244 | 3905410 | Stenotrophomonas maltophilia strain FZD2 chromosome, complete genome | blastn | 16700 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas maltophilia | ||
| 2348528 | 2348528 | PRJNA358209_P_NODE_922_length_163_cov_0.894737_g920_i0 | PRJNA358209 | 922 | 163 | 0.894737 | 1.45842131 | Escherichia | 561 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g920 | i0 | 100 | 100 | 163 | 0 | 100 | 0 | 1 | 163 | 4737328 | 4737490 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 16300 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 4226063 | 4226063 | PRJNA358209_P_NODE_1144_length_161_cov_0.910714_g1142_i0 | PRJNA358209 | 1144 | 161 | 0.910714 | 1.46624954 | Flavobacterium channae | 2897181 | Bacteria | Bacteria | 231 | 1.5999999999999997e-56 | NTclustered | gi|2164478757|gb|CP089096.1| | 2897181 | g1142 | i0 | 93.038 | 4.00621118012422 | 158 | 11 | 98 | 0 | 2 | 159 | 2560933 | 2560776 | Flavobacterium channae strain KSM-R2A30 chromosome, complete genome | blastn | 645 | 231 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium channae | |
| 4901118 | 4901118 | PRJNA358209_P_NODE_1084_length_162_cov_0.902655_g1082_i0 | PRJNA358209 | 1084 | 162 | 0.902655 | 1.4623011 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g1082 | i0 | 100 | 100 | 162 | 0 | 100 | 0 | 1 | 162 | 323560 | 323399 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 16200 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 6176166 | 6176166 | PRJNA358209_P_NODE_1145_length_161_cov_0.910714_g1143_i0 | PRJNA358209 | 1145 | 161 | 0.910714 | 1.46624954 | Achromobacter | 222 | Bacteria | Bacteria | 287 | 3.37e-73 | NTclustered | gi|1339542680|gb|CP014060.2| | 85698 | g1143 | i0 | 98.758 | 80.7701863354037 | 161 | 2 | 100 | 0 | 1 | 161 | 5879758 | 5879598 | Achromobacter xylosoxidans strain FDAARGOS_147 chromosome, complete genome | blastn | 13004 | 287 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Achromobacter | Achromobacter xylosoxidans | ||
| 6776547 | 6776547 | PRJNA358209_P_NODE_726_length_165_cov_0.879310_g724_i0 | PRJNA358209 | 726 | 165 | 0.87931 | 1.4508615 | Qipengyuania aurantiaca | 2867233 | Bacteria | Bacteria | 191 | 2.7999999999999995e-44 | NTclustered | gi|2084061252|gb|CP081295.1| | 2867233 | g724 | i0 | 87.805 | 51.0121212121212 | 164 | 18 | 99 | 2 | 3 | 165 | 1194820 | 1194658 | Qipengyuania aurantiaca strain 1NDH13 chromosome | blastn | 8417 | 191 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Erythrobacteraceae | Qipengyuania | Qipengyuania aurantiaca | ||
| 7451071 | 7451071 | PRJNA358209_P_NODE_266_length_201_cov_1.342105_g264_i0 | PRJNA358209 | 266 | 201 | 1.342105 | 2.69763105 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 372 | 1.18e-98 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g264 | i0 | 100 | 100 | 201 | 0 | 100 | 0 | 1 | 201 | 4579404 | 4579604 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 20100 | 372 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 7451072 | 7451072 | PRJNA358209_P_NODE_386_length_177_cov_1.593750_g384_i0 | PRJNA358209 | 386 | 177 | 1.59375 | 2.8209375 | Pseudomonas | 286 | Bacteria | Bacteria | 250 | 4.94e-62 | NTclustered | gi|1482339045|gb|CP032419.1| | 2320867 | g384 | i0 | 92.982 | 76.0395480225989 | 171 | 12 | 97 | 0 | 1 | 171 | 4342784 | 4342954 | Pseudomonas cavernae strain K2W31S-8 chromosome, complete genome | blastn | 13459 | 250 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas cavernae | ||
| 7451073 | 7451073 | PRJNA358209_P_NODE_426_length_171_cov_1.393443_g424_i0 | PRJNA358209 | 426 | 171 | 1.393443 | 2.38278753 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 311 | 2.14e-80 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g424 | i0 | 99.415 | 100 | 171 | 1 | 100 | 0 | 1 | 171 | 1529739 | 1529569 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 17100 | 311 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 7451078 | 7451078 | PRJNA358209_P_NODE_66_length_375_cov_0.895706_g64_i0 | PRJNA358209 | 66 | 375 | 0.895706 | 3.3588975 | Escherichia | 561 | Bacteria | Bacteria | 693 | 0 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g64 | i0 | 100 | 101 | 375 | 0 | 100 | 0 | 1 | 375 | 3869639 | 3870013 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 37875 | 693 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 8052152 | 8052152 | PRJNA358209_P_NODE_507_length_167_cov_0.864407_g505_i0 | PRJNA358209 | 507 | 167 | 0.864407 | 1.44355969 | Pseudomonas aeruginosa | 287 | Bacteria | Bacteria | 305 | 9.74e-79 | NTclustered | gi|2612533597|gb|CP136986.1| | 287 | g505 | i0 | 100 | 209.62874251497 | 165 | 0 | 99 | 0 | 3 | 167 | 7246105 | 7246269 | Pseudomonas aeruginosa strain 2021CK-01020 chromosome, complete genome | blastn | 35008 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 8725822 | 8725822 | PRJNA358209_P_NODE_1247_length_161_cov_0.910714_g1245_i0 | PRJNA358209 | 1247 | 161 | 0.910714 | 1.46624954 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g1245 | i0 | 100 | 100 | 161 | 0 | 100 | 0 | 1 | 161 | 2986586 | 2986746 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 16100 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 8725828 | 8725828 | PRJNA358209_P_NODE_607_length_166_cov_0.871795_g605_i0 | PRJNA358209 | 607 | 166 | 0.871795 | 1.4471797 | Escherichia | 561 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g605 | i0 | 100 | 100 | 166 | 0 | 100 | 0 | 1 | 166 | 2918661 | 2918496 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 16600 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 8725831 | 8725831 | PRJNA358209_P_NODE_767_length_165_cov_0.879310_g765_i0 | PRJNA358209 | 767 | 165 | 0.87931 | 1.4508615 | Paracoccus | 265 | Bacteria | Bacteria | 294 | 2.08e-75 | NTclustered | gi|1273828884|gb|CP024422.1| | 147645 | g765 | i0 | 98.788 | 20.4181818181818 | 165 | 2 | 100 | 0 | 1 | 165 | 3010400 | 3010564 | Paracoccus yeei strain TT13 chromosome, complete genome | blastn | 3369 | 294 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus yeei | ||
| 9327018 | 9327018 | PRJNA358209_P_NODE_688_length_165_cov_0.879310_g686_i0 | PRJNA358209 | 688 | 165 | 0.87931 | 1.4508615 | Lautropia mirabilis | 47671 | Bacteria | Bacteria | 289 | 9.66e-74 | NTclustered | gi|2694691658|gb|CP146356.1| | 47671 | g686 | i0 | 98.182 | 3 | 165 | 3 | 100 | 0 | 1 | 165 | 2402263 | 2402099 | Lautropia mirabilis strain 512852 chromosome, complete genome | blastn | 495 | 289 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Lautropia | Lautropia mirabilis | ||
| 10001310 | 10001310 | PRJNA358209_P_NODE_1128_length_162_cov_0.902655_g1126_i0 | PRJNA358209 | 1128 | 162 | 0.902655 | 1.4623011 | Escherichia | 561 | Bacteria | Bacteria | 294 | 2.03e-75 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g1126 | i0 | 99.383 | 100 | 162 | 1 | 100 | 0 | 1 | 162 | 1531140 | 1531301 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 16200 | 294 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 10602655 | 10602655 | PRJNA358209_P_NODE_889_length_163_cov_1.456140_g887_i0 | PRJNA358209 | 889 | 163 | 1.45614 | 2.3735082 | Phyllobacterium myrsinacearum | 28101 | Bacteria | Bacteria | 105 | 9.9e-26 | NR | WP_105736151.1 | 28101 | g887 | i0 | 100 | 2.98159509202454 | 54 | 0 | 99.4 | 0 | 163 | 2 | 78 | 131 | WP_105736151.1 carboxylating nicotinate-nucleotide diphosphorylase [Phyllobacterium myrsinacearum] | diamond | 486 | 105 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Phyllobacterium | Phyllobacterium myrsinacearum | ||
| 11276400 | 11276400 | PRJNA358209_P_NODE_1089_length_162_cov_0.902655_g1087_i0 | PRJNA358209 | 1089 | 162 | 0.902655 | 1.4623011 | Escherichia | 561 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2841922414|gb|CP163901.1| | 562 | g1087 | i0 | 100 | 100 | 162 | 0 | 100 | 0 | 1 | 162 | 2974337 | 2974498 | Escherichia coli strain OXEC-129 chromosome, complete genome | blastn | 16200 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 11276405 | 11276405 | PRJNA358209_P_NODE_229_length_213_cov_0.932927_g227_i0 | PRJNA358209 | 229 | 213 | 0.932927 | 1.98713451 | Escherichia | 561 | Bacteria | Bacteria | 394 | 2.7e-105 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g227 | i0 | 100 | 100 | 213 | 0 | 100 | 0 | 1 | 213 | 902979 | 903191 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 21300 | 394 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12551685 | 12551685 | PRJNA358209_P_NODE_1050_length_162_cov_0.902655_g1048_i0 | PRJNA358209 | 1050 | 162 | 0.902655 | 1.4623011 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g1048 | i0 | 100 | 100 | 162 | 0 | 100 | 0 | 1 | 162 | 4393756 | 4393595 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 16200 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12551694 | 12551694 | PRJNA358209_P_NODE_770_length_164_cov_2.147826_g768_i0 | PRJNA358209 | 770 | 164 | 2.147826 | 3.52243464 | Escherichia | 561 | Bacteria | Bacteria | 303 | 3.42e-78 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g768 | i0 | 100 | 100 | 164 | 0 | 100 | 0 | 1 | 164 | 4580078 | 4579915 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 16400 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 13152616 | 13152616 | PRJNA358209_P_NODE_771_length_164_cov_1.660870_g769_i0 | PRJNA358209 | 771 | 164 | 1.66087 | 2.7238268 | Ralstonia pickettii | 329 | Bacteria | Bacteria | 268 | 1.25e-67 | NTclustered | gi|2107648276|gb|CP084359.1| | 329 | g769 | i0 | 96.319 | 7.98170731707317 | 163 | 6 | 99 | 0 | 2 | 164 | 1413201 | 1413363 | Ralstonia pickettii strain FDAARGOS_1535 chromosome 1, complete sequence | blastn | 1309 | 268 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia pickettii | ||
| 13152617 | 13152617 | PRJNA358209_P_NODE_791_length_164_cov_0.886957_g789_i0 | PRJNA358209 | 791 | 164 | 0.886957 | 1.45460948 | Phenylobacterium montanum | 2823693 | Bacteria | Bacteria | 209 | 7.68e-50 | NTclustered | gi|2029196163|gb|CP073079.1| | 2823693 | g789 | i0 | 94.161 | 75.6524390243902 | 137 | 8 | 84 | 0 | 1 | 137 | 92127 | 91991 | Phenylobacterium montanum strain S6 plasmid unnamed, complete sequence | blastn | 12407 | 209 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Phenylobacterium | Phenylobacterium montanum | ||
| 14427675 | 14427675 | PRJNA358209_P_NODE_652_length_166_cov_0.871795_g650_i0 | PRJNA358209 | 652 | 166 | 0.871795 | 1.4471797 | Bradyrhizobium diazoefficiens | 1355477 | Bacteria | Bacteria | 274 | 2.73e-69 | NTclustered | gi|1955059318|gb|CP067102.1| | 1355477 | g650 | i0 | 96.386 | 98.2228915662651 | 166 | 6 | 100 | 0 | 1 | 166 | 3697943 | 3698108 | Bradyrhizobium diazoefficiens strain 36_1 chromosome, complete genome | blastn | 16305 | 274 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium diazoefficiens | ||
| 15100950 | 15100950 | PRJNA358209_P_NODE_312_length_191_cov_1.077465_g310_i0 | PRJNA358209 | 312 | 191 | 1.077465 | 2.05795815 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 353 | 4.02e-93 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g310 | i0 | 100 | 100 | 191 | 0 | 100 | 0 | 1 | 191 | 1335449 | 1335259 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 19100 | 353 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 15100953 | 15100953 | PRJNA358209_P_NODE_372_length_180_cov_1.526718_g370_i0 | PRJNA358209 | 372 | 180 | 1.526718 | 2.7480924 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 327 | 2.2699999999999996e-85 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g370 | i0 | 99.444 | 101.7 | 180 | 1 | 100 | 0 | 1 | 180 | 12472 | 12293 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 18306 | 327 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 15701564 | 15701564 | PRJNA358209_P_NODE_1153_length_161_cov_0.910714_g1151_i0 | PRJNA358209 | 1153 | 161 | 0.910714 | 1.46624954 | Achromobacter xylosoxidans | 85698 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|2809278131|gb|CP116209.1| | 85698 | g1151 | i0 | 100 | 101.031055900621 | 161 | 0 | 100 | 0 | 1 | 161 | 4994577 | 4994417 | MAG: Achromobacter xylosoxidans isolate IITD-KLINJ-A02 chromosome | blastn | 16266 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Achromobacter | Achromobacter xylosoxidans | ||
| 16375641 | 16375641 | PRJNA358209_P_NODE_453_length_167_cov_0.864407_g451_i0 | PRJNA358209 | 453 | 167 | 0.864407 | 1.44355969 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 309 | 7.53e-80 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g451 | i0 | 100 | 100 | 167 | 0 | 100 | 0 | 1 | 167 | 4394217 | 4394383 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 16700 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 16375645 | 16375645 | PRJNA358209_P_NODE_593_length_166_cov_0.871795_g591_i0 | PRJNA358209 | 593 | 166 | 0.871795 | 1.4471797 | Escherichia | 561 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g591 | i0 | 100 | 100 | 166 | 0 | 100 | 0 | 1 | 166 | 3109125 | 3109290 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 16600 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 17650787 | 17650787 | PRJNA358209_P_NODE_1014_length_162_cov_0.902655_g1012_i0 | PRJNA358209 | 1014 | 162 | 0.902655 | 1.4623011 | Bacteria | 2 | Bacteria | Bacteria | 148 | 1.6699999999999999e-31 | NTclustered | gi|2261012671|gb|CP099617.1| | 2952887 | g1012 | i0 | 89.167 | 52.4506172839506 | 120 | 12 | 73 | 1 | 43 | 161 | 2444931 | 2444812 | Sphingomonadaceae bacterium OTU29LAMAA1 chromosome, complete genome | blastn | 8497 | 148 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonadaceae bacterium OTU29LAMAA1 | |||
| 17650793 | 17650793 | PRJNA358209_P_NODE_1234_length_161_cov_0.910714_g1232_i0 | PRJNA358209 | 1234 | 161 | 0.910714 | 1.46624954 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g1232 | i0 | 100 | 100 | 161 | 0 | 100 | 0 | 1 | 161 | 26400 | 26560 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 16100 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 17650796 | 17650796 | PRJNA358209_P_NODE_314_length_191_cov_1.077465_g312_i0 | PRJNA358209 | 314 | 191 | 1.077465 | 2.05795815 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 353 | 4.02e-93 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g312 | i0 | 100 | 101 | 191 | 0 | 100 | 0 | 1 | 191 | 4462649 | 4462839 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 19291 | 353 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 17650798 | 17650798 | PRJNA358209_P_NODE_394_length_176_cov_1.771654_g392_i0 | PRJNA358209 | 394 | 176 | 1.771654 | 3.11811104 | root | 1 | Root_unresolved | Root_unresolved | 326 | 7.92e-85 | NTclustered | gi|2706519156|gb|CP149578.1| | 287 | g392 | i0 | 100 | 100 | 176 | 0 | 100 | 0 | 1 | 176 | 6007946 | 6007771 | Mutant Pseudomonas aeruginosa isolate FELIX_MS413, complete genome | blastn | 17600 | 326 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 17650804 | 17650804 | PRJNA358209_P_NODE_874_length_164_cov_0.886957_g872_i0 | PRJNA358209 | 874 | 164 | 0.886957 | 1.45460948 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 298 | 1.59e-76 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g872 | i0 | 99.39 | 101 | 164 | 1 | 100 | 0 | 1 | 164 | 3685411 | 3685574 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 16564 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18250547 | 18250547 | PRJNA358209_P_NODE_835_length_164_cov_0.886957_g833_i0 | PRJNA358209 | 835 | 164 | 0.886957 | 1.45460948 | Bradyrhizobium sp. CIAT3101 | 439387 | Bacteria | Bacteria | 106 | 1.04e-18 | NTclustered | gi|2484545193|gb|CP121634.1| | 439387 | g833 | i0 | 95.522 | 1.01829268292683 | 67 | 2 | 40 | 1 | 12 | 77 | 4271894 | 4271960 | Bradyrhizobium sp. CIAT3101 chromosome, complete genome | blastn | 167 | 106 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. CIAT3101 | ||
| 18924618 | 18924618 | PRJNA358209_P_NODE_1015_length_162_cov_0.902655_g1013_i0 | PRJNA358209 | 1015 | 162 | 0.902655 | 1.4623011 | Escherichia | 561 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g1013 | i0 | 100 | 101 | 162 | 0 | 100 | 0 | 1 | 162 | 3396988 | 3397149 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 16362 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18924620 | 18924620 | PRJNA358209_P_NODE_1155_length_161_cov_0.910714_g1153_i0 | PRJNA358209 | 1155 | 161 | 0.910714 | 1.46624954 | Neisseria | 482 | Bacteria | Bacteria | 281 | 1.57e-71 | NTclustered | gi|1884496373|gb|CP059566.1| | 490 | g1153 | i0 | 98.137 | 195.521739130435 | 161 | 3 | 100 | 0 | 1 | 161 | 2545352 | 2545512 | Neisseria sicca strain DSM 17713 chromosome, complete genome | blastn | 31479 | 281 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | Neisseria sicca | ||
| 18924621 | 18924621 | PRJNA358209_P_NODE_175_length_236_cov_1.090909_g173_i0 | PRJNA358209 | 175 | 236 | 1.090909 | 2.57454524 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 436 | 4.999999999999999e-118 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g173 | i0 | 100 | 100 | 236 | 0 | 100 | 0 | 1 | 236 | 844401 | 844166 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 23600 | 436 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18924627 | 18924627 | PRJNA358209_P_NODE_375_length_180_cov_1.167939_g373_i0 | PRJNA358209 | 375 | 180 | 1.167939 | 2.1022902 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 333 | 4.87e-87 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g373 | i0 | 100 | 100 | 180 | 0 | 100 | 0 | 1 | 180 | 2045704 | 2045883 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 18000 | 333 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18924630 | 18924630 | PRJNA358209_P_NODE_535_length_167_cov_0.864407_g533_i0 | PRJNA358209 | 535 | 167 | 0.864407 | 1.44355969 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 309 | 7.53e-80 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g533 | i0 | 100 | 100 | 167 | 0 | 100 | 0 | 1 | 167 | 4525015 | 4525181 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 16700 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18924633 | 18924633 | PRJNA358209_P_NODE_635_length_166_cov_0.871795_g633_i0 | PRJNA358209 | 635 | 166 | 0.871795 | 1.4471797 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|1359181517|gb|CP027256.1| | 562 | g633 | i0 | 100 | 101 | 166 | 0 | 100 | 0 | 1 | 166 | 100379 | 100214 | Escherichia coli strain EC11 plasmid unnamed1, complete sequence | blastn | 16766 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20199227 | 20199227 | PRJNA358209_P_NODE_176_length_236_cov_1.090909_g174_i0 | PRJNA358209 | 176 | 236 | 1.090909 | 2.57454524 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 436 | 4.999999999999999e-118 | NTclustered | gi|2841922414|gb|CP163901.1| | 562 | g174 | i0 | 100 | 100 | 236 | 0 | 100 | 0 | 1 | 236 | 3173592 | 3173357 | Escherichia coli strain OXEC-129 chromosome, complete genome | blastn | 23600 | 436 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20199228 | 20199228 | PRJNA358209_P_NODE_256_length_206_cov_0.974522_g254_i0 | PRJNA358209 | 256 | 206 | 0.974522 | 2.00751532 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 381 | 2.0199999999999994e-101 | NTclustered | gi|1391530997|gb|MH061383.1| | 287 | g254 | i0 | 100 | 100 | 206 | 0 | 100 | 0 | 1 | 206 | 117524 | 117729 | Pseudomonas aeruginosa plasmid pP6qnrS1, complete sequence | blastn | 20600 | 381 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 20800392 | 20800392 | PRJNA358209_P_NODE_537_length_167_cov_0.864407_g535_i0 | PRJNA358209 | 537 | 167 | 0.864407 | 1.44355969 | Bradyrhizobium sp. CCBAU 53340 | 1325112 | Bacteria | Bacteria | 154 | 3.73e-33 | NTclustered | gi|1929551144|gb|CP030055.1| | 1325112 | g535 | i0 | 93.269 | 1.73652694610778 | 104 | 7 | 62 | 0 | 1 | 104 | 5810192 | 5810295 | Bradyrhizobium sp. CCBAU 53340 chromosome, complete genome | blastn | 290 | 154 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. CCBAU 53340 | ||
| 20800397 | 20800397 | PRJNA358209_P_NODE_677_length_165_cov_0.879310_g675_i0 | PRJNA358209 | 677 | 165 | 0.87931 | 1.4508615 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 107 | 2.48e-25 | NR | MEW6596987.1 | 1977087 | g675 | i0 | 100 | 0.945454545454545 | 52 | 0 | 94.5 | 0 | 3 | 158 | 137 | 188 | MEW6596987.1 ATP-binding cassette domain-containing protein [Pseudomonadota bacterium] | diamond | 156 | 107 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 21474855 | 21474855 | PRJNA358209_P_NODE_977_length_163_cov_0.894737_g975_i0 | PRJNA358209 | 977 | 163 | 0.894737 | 1.45842131 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g975 | i0 | 100 | 100 | 163 | 0 | 100 | 0 | 1 | 163 | 843301 | 843139 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 16300 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 22749995 | 22749995 | PRJNA358209_P_NODE_278_length_198_cov_1.026846_g276_i0 | PRJNA358209 | 278 | 198 | 1.026846 | 2.03315508 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 366 | 5.4e-97 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g276 | i0 | 100 | 101 | 198 | 0 | 100 | 0 | 1 | 198 | 792952 | 792755 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 19998 | 366 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 22750000 | 22750000 | PRJNA358209_P_NODE_538_length_167_cov_0.864407_g536_i0 | PRJNA358209 | 538 | 167 | 0.864407 | 1.44355969 | Pseudomonas | 286 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|2446527964|gb|CP118153.1| | 587753 | g536 | i0 | 96.774 | 0.353293413173653 | 31 | 1 | 19 | 0 | 65 | 95 | 3028716 | 3028746 | Pseudomonas chlororaphis strain ATCC 17811 chromosome, complete genome | blastn | 59 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas chlororaphis | ||
| 23350870 | 23350870 | PRJNA358209_P_NODE_359_length_183_cov_1.492537_g357_i0 | PRJNA358209 | 359 | 183 | 1.492537 | 2.73134271 | Stenotrophomonas maltophilia | 40324 | Bacteria | Bacteria | 333 | 4.97e-87 | NTclustered | gi|1317213726|gb|CP025298.1| | 40324 | g357 | i0 | 99.454 | 98.8251366120219 | 183 | 1 | 100 | 0 | 1 | 183 | 3975631 | 3975813 | Stenotrophomonas maltophilia strain CSM2 chromosome, complete genome | blastn | 18085 | 333 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas maltophilia | ||
| 23350872 | 23350872 | PRJNA358209_P_NODE_479_length_167_cov_0.864407_g477_i0 | PRJNA358209 | 479 | 167 | 0.864407 | 1.44355969 | Devosia sp. A16 | 1736675 | Bacteria | Bacteria | 87.9 | 3.84e-13 | NTclustered | gi|940663964|gb|CP012945.1| | 1736675 | g477 | i0 | 81.905 | 0.62874251497006 | 105 | 17 | 62 | 2 | 48 | 151 | 3819337 | 3819234 | Devosia sp. A16, complete genome | blastn | 105 | 87.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Devosiaceae | Devosia | Devosia sp. A16 | ||
| 24024903 | 24024903 | PRJNA358209_P_NODE_1019_length_162_cov_0.902655_g1017_i0 | PRJNA358209 | 1019 | 162 | 0.902655 | 1.4623011 | Alphaproteobacteria | 28211 | Bacteria | Bacteria | 217 | 4.5199999999999996e-52 | NTclustered | gi|469477505|gb|CP004036.1| | 745310 | g1017 | i0 | 90.741 | 116.79012345679 | 162 | 15 | 100 | 0 | 1 | 162 | 3776370 | 3776531 | Sphingomonas sp. MM-1, complete genome | blastn | 18920 | 217 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. MM-1 | ||
| 24024912 | 24024912 | PRJNA358209_P_NODE_439_length_168_cov_1.428571_g437_i0 | PRJNA358209 | 439 | 168 | 1.428571 | 2.39999928 | Escherichia | 561 | Bacteria | Bacteria | 311 | 2.11e-80 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g437 | i0 | 100 | 102.892857142857 | 168 | 0 | 100 | 0 | 1 | 168 | 1199046 | 1198879 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 17286 | 311 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 24625123 | 24625123 | PRJNA358209_P_NODE_1160_length_161_cov_0.910714_g1158_i0 | PRJNA358209 | 1160 | 161 | 0.910714 | 1.46624954 | Delftia sp. HK171 | 1920191 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|1108554743|gb|CP018101.1| | 1920191 | g1158 | i0 | 100 | 30.0186335403727 | 161 | 0 | 100 | 0 | 1 | 161 | 5497932 | 5498092 | Delftia sp. HK171, complete genome | blastn | 4833 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Delftia | Delftia sp. HK171 | ||
| 24625137 | 24625137 | PRJNA358209_P_NODE_740_length_165_cov_0.879310_g738_i0 | PRJNA358209 | 740 | 165 | 0.87931 | 1.4508615 | Faucicola osloensis | 34062 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|1278991277|gb|CP024180.2| | 34062 | g738 | i0 | 100 | 15.9636363636364 | 165 | 0 | 100 | 0 | 1 | 165 | 1632405 | 1632569 | Moraxella osloensis strain KSH chromosome, complete genome | blastn | 2634 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 25299357 | 25299357 | PRJNA358209_P_NODE_700_length_165_cov_0.879310_g698_i0 | PRJNA358209 | 700 | 165 | 0.87931 | 1.4508615 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g698 | i0 | 100 | 100 | 165 | 0 | 100 | 0 | 1 | 165 | 259126 | 258962 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 16500 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 26870833 | 26870833 | PRJNA358209_P_NODE_1061_length_162_cov_0.902655_g1059_i0 | PRJNA358209 | 1061 | 162 | 0.902655 | 1.4623011 | Halomonadaceae | 28256 | Bacteria | Bacteria | 97.4 | 6.67e-22 | NR | WP_077529624.1 | 86177 | g1059 | i0 | 88.2 | 3.77777777777778 | 51 | 6 | 94.4 | 0 | 6 | 158 | 724 | 774 | WP_077529624.1 DUF1631 family protein [Vreelandella utahensis] | diamond | 612 | 98.2 | 0.991853360488798 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Halomonadaceae | Vreelandella | Vreelandella halophila | ||
| 26916668 | 26916668 | PRJNA358209_P_NODE_1242_length_161_cov_0.910714_g1240_i0 | PRJNA358209 | 1242 | 161 | 0.910714 | 1.46624954 | Marinobacter sp. | 50741 | Bacteria | Bacteria | 81.6 | 3.99e-18 | NR | HEV8078339.1 | 50741 | g1240 | i0 | 90.9 | 1.6583850931677 | 44 | 4 | 82 | 0 | 1 | 132 | 8 | 51 | HEV8078339.1 MFS transporter [Marinobacter sp.] | diamond | 267 | 81.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Marinobacteraceae | Marinobacter | Marinobacter sp. | ||
| 26948188 | 26948188 | PRJNA358209_P_NODE_782_length_164_cov_0.886957_g780_i0 | PRJNA358209 | 782 | 164 | 0.886957 | 1.45460948 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 71.6 | 8.18e-13 | NR | MCM2280861.1 | 2026715 | g780 | i0 | 68.8 | 0.878048780487805 | 48 | 15 | 87.8 | 0 | 147 | 4 | 8 | 55 | MCM2280861.1 electron transfer flavoprotein-ubiquinone oxidoreductase [Pseudobdellovibrionaceae bacterium] | diamond | 144 | 71.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 28102536 | 28102536 | PRJNA358209_P_NODE_665_length_165_cov_0.956897_g663_i0 | PRJNA358209 | 665 | 165 | 0.956897 | 1.57888005 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 39.7 | 0.049 | NR | MBN0217501.1 | 287 | g663 | i0 | 41.7 | 1.74545454545455 | 48 | 25 | 85.5 | 2 | 2 | 142 | 10 | 55 | MBN0217501.1 MFS transporter [Pseudomonas aeruginosa] | diamond | 288 | 39.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 28559351 | 28559351 | PRJNA358209_P_NODE_187_length_233_cov_0.869565_g185_i0 | PRJNA358209 | 187 | 233 | 0.869565 | 2.02608645 | Rubripirellula sp. | 1973111 | Bacteria | Bacteria | 42.4 | 0.0442 | NR | MDE0864581.1 | 1973111 | g185 | i0 | 43.1 | 0.656652360515021 | 51 | 29 | 65.7 | 0 | 71 | 223 | 332 | 382 | MDE0864581.1 sulfatase [Rubripirellula sp.] | diamond | 153 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Rubripirellula | Rubripirellula sp. | |
| 28811445 | 28811445 | PRJNA358209_P_NODE_1028_length_162_cov_0.902655_g1026_i0 | PRJNA358209 | 1028 | 162 | 0.902655 | 1.4623011 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 75.1 | 4.71e-14 | NR | MDO8675294.1 | 2035772 | g1026 | i0 | 82.6 | 0.851851851851852 | 46 | 8 | 85.2 | 0 | 5 | 142 | 372 | 417 | MDO8675294.1 TonB family protein [Candidatus Omnitrophota bacterium] | diamond | 138 | 75.1 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 29285226 | 29285226 | PRJNA358209_P_NODE_1109_length_162_cov_0.902655_g1107_i0 | PRJNA358209 | 1109 | 162 | 0.902655 | 1.4623011 | Salicola sp. Rm-C-2C1-2 | 3141321 | Bacteria | Bacteria | 72.8 | 3.19e-13 | NR | WP_349750058.1 | 3141321 | g1107 | i0 | 81 | 0.777777777777778 | 42 | 8 | 77.8 | 0 | 156 | 31 | 235 | 276 | WP_349750058.1 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL [Salicola sp. Rm-C-2C1-2] | diamond | 126 | 72.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Halomonadaceae | Salicola | Salicola sp. Rm-C-2C1-2 | ||
| 29460050 | 29460050 | PRJNA358209_P_NODE_490_length_167_cov_0.864407_g488_i0 | PRJNA358209 | 490 | 167 | 0.864407 | 1.44355969 | Nevskia | 64001 | Bacteria | Bacteria | 112 | 2.79e-27 | NR | WP_051748936.1 | 418856 | g488 | i0 | 90.9 | 1.97604790419162 | 55 | 5 | 98.8 | 0 | 165 | 1 | 570 | 624 | WP_051748936.1 S46 family peptidase [Nevskia soli] | diamond | 330 | 112 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Nevskia | Nevskia soli | ||
| 30706692 | 30706692 | PRJNA358209_P_NODE_1094_length_162_cov_0.902655_g1092_i0 | PRJNA358209 | 1094 | 162 | 0.902655 | 1.4623011 | Caulobacter sp. CCUG 6 | 78 | Bacteria | Bacteria | 108 | 1.09e-25 | NR | WP_242918357.1 | 2100090 | g1092 | i0 | 98.1 | 0.981481481481482 | 53 | 1 | 98.1 | 0 | 160 | 2 | 1623 | 1675 | WP_242918357.1 filamentous haemagglutinin family protein [Caulobacter sp. CCUG 60055] | diamond | 159 | 108 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Caulobacter | Caulobacter sp. CCUG 60055 | ||
| 31054608 | 31054608 | PRJNA358209_P_NODE_975_length_163_cov_0.894737_g973_i0 | PRJNA358209 | 975 | 163 | 0.894737 | 1.45842131 | Rhodovibrio salinarum | 1087 | Bacteria | Bacteria | 87 | 3.12e-18 | NR | MBK1697528.1 | 1087 | g973 | i0 | 79.2 | 1.76687116564417 | 48 | 10 | 88.3 | 0 | 145 | 2 | 316 | 363 | MBK1697528.1 aspartate--tRNA ligase [Rhodovibrio salinarum] | diamond | 288 | 87 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Rhodovibrionaceae | Rhodovibrio | Rhodovibrio salinarum | ||
| 31465580 | 31465580 | PRJNA358209_P_NODE_676_length_165_cov_0.879310_g674_i0 | PRJNA358209 | 676 | 165 | 0.87931 | 1.4508615 | Rickettsiales bacterium | 2026788 | Bacteria | Bacteria | 64.7 | 2.28e-10 | NR | MBK67232.1 | 2026788 | g674 | i0 | 59.3 | 0.981818181818182 | 54 | 22 | 98.2 | 0 | 163 | 2 | 394 | 447 | MBK67232.1 hypothetical protein [Rickettsiales bacterium] | diamond | 162 | 64.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | Rickettsiales bacterium | ||||
| 32431659 | 32431659 | PRJNA358209_P_NODE_679_length_165_cov_0.879310_g677_i0 | PRJNA358209 | 679 | 165 | 0.87931 | 1.4508615 | Pseudomonas | 286 | Bacteria | Bacteria | 47.8 | 2.16e-4 | NR | MEW6597180.1 | 1977087 | g677 | i0 | 100 | 0.727272727272727 | 20 | 0 | 36.4 | 0 | 164 | 105 | 444 | 463 | MEW6597180.1 glutamine synthetase family protein [Pseudomonadota bacterium] | diamond | 120 | 47.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 32541239 | 32541239 | PRJNA358209_P_NODE_779_length_164_cov_0.886957_g777_i0 | PRJNA358209 | 779 | 164 | 0.886957 | 1.45460948 | Thiohalorhabdaceae bacterium | 3107638 | Bacteria | Bacteria | 68.9 | 5.36e-12 | NR | MFB6259944.1 | 3107638 | g777 | i0 | 93.9 | 0.603658536585366 | 33 | 2 | 60.4 | 0 | 162 | 64 | 289 | 321 | MFB6259944.1 ABC transporter ATP-binding protein [Thiohalorhabdaceae bacterium] | diamond | 99 | 68.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Thiohalorhabdales | Thiohalorhabdaceae | Thiohalorhabdaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;