contig_metadata
18 rows where bioproject = "PRJNA358049" and tax_clade = "Bacteria candidate phyla"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3623831 | 3623831 | PRJNA358049_S_NODE_6443_length_243_cov_13.056701_g6395_i0 | PRJNA358049 | 6443 | 243 | 13.056701 | 31.72778343 | Candidatus Saccharimonadota | 95818 | Bacteria | Bacteria | 300 | 7.08e-77 | NTclustered | gi|2070586293|gb|CP076101.2| | 1917697 | g6395 | i0 | 92.754 | 195.267489711934 | 207 | 15 | 85 | 0 | 14 | 220 | 115461 | 115255 | MAG: Candidatus Saccharimonas sp. isolate JCVI_32_bin.49 chromosome, complete genome | blastn | 47450 | 300 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Saccharimonas | Candidatus Saccharimonas sp. | ||
| 6776063 | 6776063 | PRJNA358049_S_NODE_11906_length_191_cov_1.323944_g11858_i0 | PRJNA358049 | 11906 | 191 | 1.323944 | 2.52873304 | candidate division WOR-3 bacterium | 2052148 | Bacteria | Bacteria | 73.1 | 1.26e-8 | NTclustered | gi|2108275290|gb|CP070680.1| | 2052148 | g11858 | i0 | 85.714 | 11.2251308900524 | 70 | 9 | 36 | 1 | 102 | 170 | 1347588 | 1347519 | MAG: candidate division WOR-3 bacterium isolate bin69 chromosome | blastn | 2144 | 73.1 | 1 | Bacteria | Bacteria candidate phyla | candidate division WOR-3 | candidate division WOR-3 bacterium | ||||||
| 10602274 | 10602274 | PRJNA358049_S_NODE_14809_length_174_cov_1.984000_g14761_i0 | PRJNA358049 | 14809 | 174 | 1.984 | 3.45216 | Candidatus Minimicrobia naudis | 2841263 | Bacteria | Bacteria | 224 | 2.93e-54 | NTclustered | gi|2052595119|gb|CP076460.1| | 2841263 | g14761 | i0 | 91.411 | 90.4540229885057 | 163 | 14 | 94 | 0 | 12 | 174 | 122984 | 123146 | Candidatus Minimicrobia naudis isolate IHU1 chromosome, complete genome | blastn | 15739 | 224 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Minimicrobia | Candidatus Minimicrobia naudis | |||||
| 15701475 | 15701475 | PRJNA358049_S_NODE_7633_length_226_cov_1.898305_g7585_i0 | PRJNA358049 | 7633 | 226 | 1.898305 | 4.2901693 | Patescibacteria group bacterium | 2052139 | Bacteria | Bacteria | 115 | 2.5300000000000003e-21 | NTclustered | gi|2621785934|emb|OY782392.1| | 2052139 | g7585 | i0 | 85.217 | 1.01769911504425 | 115 | 14 | 50 | 3 | 78 | 190 | 429477 | 429590 | MAG: Patescibacteria group bacterium isolate 573f42cd-6ce4-4b95-a45b-0ed028197a55 genome assembly, chromosome: 1 | blastn | 230 | 115 | 1 | Bacteria | Bacteria candidate phyla | Patescibacteria group bacterium | |||||||
| 19524550 | 19524550 | PRJNA358049_S_NODE_5256_length_266_cov_1.658986_g5208_i0 | PRJNA358049 | 5256 | 266 | 1.658986 | 4.41290276 | candidate division SR1 bacterium RAAC1_SR1_1 | 1394709 | Bacteria | Bacteria | 267 | 7.979999999999999e-67 | NTclustered | gi|563351663|gb|CP006913.1| | 1394709 | g5208 | i0 | 84.962 | 220.195488721805 | 266 | 36 | 99 | 4 | 4 | 266 | 125422 | 125686 | Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome | blastn | 58572 | 267 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Absconditibacteriota | candidate division SR1 bacterium RAAC1_SR1_1 | ||||||
| 19524591 | 19524591 | PRJNA358049_S_NODE_6696_length_239_cov_2.673684_g6648_i0 | PRJNA358049 | 6696 | 239 | 2.673684 | 6.39010476 | candidate division SR1 bacterium RAAC1_SR1_1 | 1394709 | Bacteria | Bacteria | 239 | 1.54e-58 | NTclustered | gi|563351663|gb|CP006913.1| | 1394709 | g6648 | i0 | 84.874 | 94.0334728033473 | 238 | 34 | 99 | 2 | 3 | 239 | 125669 | 125905 | Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome | blastn | 22474 | 239 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Absconditibacteriota | candidate division SR1 bacterium RAAC1_SR1_1 | ||||||
| 20800279 | 20800279 | PRJNA358049_S_NODE_6737_length_239_cov_1.105263_g6689_i0 | PRJNA358049 | 6737 | 239 | 1.105263 | 2.64157857 | Candidatus Nanogingivalaceae bacterium | 2725942 | Bacteria | Bacteria | 436 | 5.0799999999999985e-118 | NTclustered | gi|2070571752|gb|CP072208.2| | 2725942 | g6689 | i0 | 99.582 | 211.008368200837 | 239 | 1 | 100 | 0 | 1 | 239 | 111002 | 111240 | MAG: Candidatus Nanogingivalaceae bacterium isolate JCVI_27_bin.3 chromosome, complete genome | blastn | 50431 | 436 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Nanosyncoccalia | Candidatus Nanogingivales | Candidatus Nanogingivalaceae | Candidatus Nanogingivalaceae bacterium | |||
| 23350763 | 23350763 | PRJNA358049_S_NODE_6279_length_246_cov_3.096447_g6231_i0 | PRJNA358049 | 6279 | 246 | 3.096447 | 7.61725962 | Candidatus Nanogingivalaceae bacterium | 2725942 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2070571752|gb|CP072208.2| | 2725942 | g6231 | i0 | 100 | 72.9674796747967 | 246 | 0 | 100 | 0 | 1 | 246 | 111645 | 111400 | MAG: Candidatus Nanogingivalaceae bacterium isolate JCVI_27_bin.3 chromosome, complete genome | blastn | 17950 | 455 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Nanosyncoccalia | Candidatus Nanogingivales | Candidatus Nanogingivalaceae | Candidatus Nanogingivalaceae bacterium | |||
| 26599740 | 26599740 | PRJNA358049_S_NODE_8981_length_212_cov_1.564417_g8933_i0 | PRJNA358049 | 8981 | 212 | 1.564417 | 3.31656404 | Candidatus Nanosynbacter sp. | 2725945 | Bacteria | Bacteria | 127 | 4.46e-35 | NR | MBF1037529.1 | 2725945 | g8933 | i0 | 97.1 | 0.976415094339623 | 69 | 2 | 97.6 | 0 | 4 | 210 | 43 | 111 | MBF1037529.1 hypothetical protein [Candidatus Nanosynbacter sp.] | diamond | 207 | 127 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. | ||
| 26694894 | 26694894 | PRJNA358049_S_NODE_11301_length_194_cov_1.379310_g11253_i0 | PRJNA358049 | 11301 | 194 | 1.37931 | 2.6758614 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 72.8 | 3.71e-14 | NR | MEJ0072657.1 | 2026720 | g11253 | i0 | 59.3 | 3.64948453608247 | 59 | 24 | 91.2 | 0 | 16 | 192 | 4 | 62 | MEJ0072657.1 HNH endonuclease [Candidatus Saccharibacteria bacterium] | diamond | 708 | 72.8 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 27612049 | 27612049 | PRJNA358049_S_NODE_18424_length_162_cov_1.380531_g18376_i0 | PRJNA358049 | 18424 | 162 | 1.380531 | 2.23646022 | Minisyncoccota bacterium | 2053589 | Bacteria | Bacteria | 62.4 | 1.42e-9 | NR | MDD4989195.1 | 2053589 | g18376 | i0 | 55.1 | 0.907407407407407 | 49 | 22 | 90.7 | 0 | 161 | 15 | 142 | 190 | MDD4989195.1 tetratricopeptide repeat protein [Candidatus Paceibacterota bacterium] | diamond | 147 | 62.4 | 1 | Bacteria | Bacteria candidate phyla | Minisyncoccota | Minisyncoccota bacterium | ||||||
| 28085464 | 28085464 | PRJNA358049_S_NODE_11545_length_193_cov_1.055556_g11497_i0 | PRJNA358049 | 11545 | 193 | 1.055556 | 2.03722308 | Candidatus Nanogingivalis gingivitcus | 2171992 | Bacteria | Bacteria | 123 | 8.669999999999998e-31 | NR | WP_129718745.1 | 2171992 | g11497 | i0 | 100 | 0.994818652849741 | 64 | 0 | 99.5 | 0 | 192 | 1 | 36 | 99 | WP_129718745.1 hypothetical protein [Candidatus Nanogingivalis gingivitcus] | diamond | 192 | 123 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Nanosyncoccalia | Candidatus Nanogingivales | Candidatus Nanogingivalaceae | Candidatus Nanogingivalis | Candidatus Nanogingivalis gingivitcus | ||
| 28481583 | 28481583 | PRJNA358049_S_NODE_12806_length_185_cov_1.889706_g12758_i0 | PRJNA358049 | 12806 | 185 | 1.889706 | 3.4959561 | Bacteria | 2 | Bacteria | Bacteria | 100 | 7.619999999999999e-23 | NR | OQB19547.1 | 1852938 | g12758 | i0 | 78.7 | 11.8702702702703 | 61 | 13 | 98.9 | 0 | 184 | 2 | 450 | 510 | OQB19547.1 MAG: Alanine--tRNA ligase [Parcubacteria group bacterium ADurb.Bin192] | diamond | 2196 | 101 | 0.99009900990099 | Bacteria | Bacteria candidate phyla | Parcubacteria group bacterium ADurb.Bin192 | |||||||
| 30643410 | 30643410 | PRJNA358049_S_NODE_14413_length_176_cov_2.456693_g14365_i0 | PRJNA358049 | 14413 | 176 | 2.456693 | 4.32377968 | Patescibacteria group bacterium | 2052139 | Bacteria | Bacteria | 58.5 | 4.03e-8 | NR | HLC69832.1 | 2052139 | g14365 | i0 | 43.1 | 2.96590909090909 | 58 | 33 | 98.9 | 0 | 1 | 174 | 348 | 405 | HLC69832.1 excinuclease ABC subunit UvrB [Patescibacteria group bacterium] | diamond | 522 | 58.5 | 1 | Bacteria | Bacteria candidate phyla | Patescibacteria group bacterium | |||||||
| 30675045 | 30675045 | PRJNA358049_S_NODE_9293_length_209_cov_1.512500_g9245_i0 | PRJNA358049 | 9293 | 209 | 1.5125 | 3.161125 | Candidatus Nanogingivalaceae bacterium | 2725942 | Bacteria | Bacteria | 125 | 1.45e-32 | NR | MBF1015493.1 | 2725942 | g9245 | i0 | 95.7 | 1.98086124401914 | 69 | 3 | 99 | 0 | 3 | 209 | 250 | 318 | MBF1015493.1 DNA recombination protein RmuC [Candidatus Nanogingivalaceae bacterium] | diamond | 414 | 125 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Nanosyncoccalia | Candidatus Nanogingivales | Candidatus Nanogingivalaceae | Candidatus Nanogingivalaceae bacterium | |||
| 31767058 | 31767058 | PRJNA358049_S_NODE_16497_length_167_cov_1.220339_g16449_i0 | PRJNA358049 | 16497 | 167 | 1.220339 | 2.03796613 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 107 | 1e-25 | NR | PIQ71616.1 | 1974857 | g16449 | i0 | 90.9 | 4.94011976047904 | 55 | 5 | 98.8 | 0 | 1 | 165 | 78 | 132 | PIQ71616.1 MAG: hypothetical protein COV87_02360 [Candidatus Roizmanbacteria bacterium CG11_big_fil_rev_8_21_14_0_20_37_16] | diamond | 825 | 107 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Roizmaniibacteriota | Candidatus Roizmanbacteria bacterium CG11_big_fil_rev_8_21_14_0_20_37_16 | ||||||
| 31876392 | 31876392 | PRJNA358049_S_NODE_6077_length_250_cov_1.268657_g6029_i0 | PRJNA358049 | 6077 | 250 | 1.268657 | 3.1716425 | Candidatus Roizmanbacteria bacterium | 2282149 | Bacteria | Bacteria | 112 | 2.25e-27 | NR | MCX6732311.1 | 2282149 | g6029 | i0 | 86.2 | 1.392 | 58 | 8 | 69.6 | 0 | 77 | 250 | 1 | 58 | MCX6732311.1 CBS domain-containing protein [Candidatus Roizmanbacteria bacterium] | diamond | 348 | 112 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Roizmaniibacteriota | Candidatus Roizmanbacteria bacterium | ||||||
| 32066275 | 32066275 | PRJNA358049_S_NODE_13418_length_182_cov_1.338346_g13370_i0 | PRJNA358049 | 13418 | 182 | 1.338346 | 2.43578972 | Patescibacteria group bacterium | 2052139 | Bacteria | Bacteria | 107 | 2.2e-27 | NR | MDE2311464.1 | 2052139 | g13370 | i0 | 83.3 | 0.989010989010989 | 60 | 10 | 98.9 | 0 | 1 | 180 | 41 | 100 | MDE2311464.1 signal peptidase I [Patescibacteria group bacterium] | diamond | 180 | 107 | 1 | Bacteria | Bacteria candidate phyla | Patescibacteria group bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;