contig_metadata
12 rows where bioproject = "PRJNA358009" and tax_superkingdom = "Archaea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2948954 | 2948954 | PRJNA358009_P_NODE_9183_length_187_cov_6.739130_g9114_i0 | PRJNA358009 | 9183 | 187 | 6.73913 | 12.6021731 | Thermoplasmata archaeon | 1906666 | Archaea | Archaea | 91.6 | 3.39e-14 | NTclustered | gi|2108430933|gb|CP070629.1| | 1906666 | g9114 | i0 | 88.158 | 21.6256684491979 | 76 | 9 | 41 | 0 | 11 | 86 | 286871 | 286946 | MAG: Thermoplasmata archaeon isolate bin983 chromosome | blastn | 4044 | 91.6 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Thermoplasmata | Thermoplasmata archaeon | |||||
| 15700786 | 15700786 | PRJNA358009_P_NODE_1113_length_364_cov_2.244444_g1052_i0 | PRJNA358009 | 1113 | 364 | 2.244444 | 8.16977616 | uncultured Methanomethylovorans sp. | 183759 | Archaea | Archaea | 243 | 1.91e-59 | NTclustered | gi|2814788356|emb|OY782867.2| | 183759 | g1052 | i0 | 99.254 | 81.7967032967033 | 134 | 1 | 62 | 0 | 4 | 137 | 340124 | 340257 | MAG: uncultured Methanomethylovorans sp. isolate 1bea500b-d65c-4789-84bd-533d56c43360 genome assembly, chromosome: 1 | blastn | 29774 | 243 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanosarcinales | Methanosarcinaceae | Methanomethylovorans | uncultured Methanomethylovorans sp. | |
| 16975542 | 16975542 | PRJNA358009_P_NODE_10714_length_178_cov_2.844961_g10645_i0 | PRJNA358009 | 10714 | 178 | 2.844961 | 5.06403058 | uncultured Methanomethylovorans sp. | 183759 | Archaea | Archaea | 313 | 6.259999999999999e-81 | NTclustered | gi|2814788356|emb|OY782867.2| | 183759 | g10645 | i0 | 99.419 | 227.921348314607 | 172 | 1 | 97 | 0 | 7 | 178 | 339821 | 339650 | MAG: uncultured Methanomethylovorans sp. isolate 1bea500b-d65c-4789-84bd-533d56c43360 genome assembly, chromosome: 1 | blastn | 40570 | 313 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanosarcinales | Methanosarcinaceae | Methanomethylovorans | uncultured Methanomethylovorans sp. | |
| 19524201 | 19524201 | PRJNA358009_P_NODE_9696_length_184_cov_4.755556_g9627_i0 | PRJNA358009 | 9696 | 184 | 4.755556 | 8.75022304 | uncultured Methanomethylovorans sp. | 183759 | Archaea | Archaea | 305 | 1.09e-78 | NTclustered | gi|2814788356|emb|OY782867.2| | 183759 | g9627 | i0 | 97.74 | 71.9891304347826 | 177 | 4 | 96 | 0 | 8 | 184 | 340789 | 340613 | MAG: uncultured Methanomethylovorans sp. isolate 1bea500b-d65c-4789-84bd-533d56c43360 genome assembly, chromosome: 1 | blastn | 13246 | 305 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanosarcinales | Methanosarcinaceae | Methanomethylovorans | uncultured Methanomethylovorans sp. | |
| 20198997 | 20198997 | PRJNA358009_P_NODE_1156_length_359_cov_3.132258_g1095_i0 | PRJNA358009 | 1156 | 359 | 3.132258 | 11.24480622 | root | 1 | Root_unresolved | Root_unresolved | 385 | 2.95e-102 | NTclustered | gi|103488695|gb|DQ516748.1| | 2190 | g1095 | i0 | 100 | 2.55710306406685 | 208 | 0 | 58 | 0 | 1 | 208 | 483 | 276 | Methanocaldococcus jannaschii spike-in control MJ-500-31 genomic sequence | blastn | 918 | 385 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanococci | Methanococcales | Methanocaldococcaceae | Methanocaldococcus | Methanocaldococcus jannaschii | |
| 25299220 | 25299220 | PRJNA358009_P_NODE_4220_length_327_cov_2.215827_g4157_i0 | PRJNA358009 | 4220 | 327 | 2.215827 | 7.24575429 | Halobacterium | 2239 | Archaea | Archaea | 185 | 2.91e-42 | NTclustered | gi|255976512|emb|FN435862.1| | 115547 | g4157 | i0 | 100 | 47.9296636085627 | 100 | 0 | 61 | 0 | 1 | 100 | 292 | 391 | Uncultured archaeon partial 16S rRNA gene, clone 15 | blastn | 15673 | 185 | 1 | Archaea | uncultured archaeon | ||||||||
| 26694891 | 26694891 | PRJNA358009_P_NODE_4761_length_327_cov_2.000000_g4698_i0 | PRJNA358009 | 4761 | 327 | 2 | 6.54 | Halocalculus aciditolerans | 1383812 | Archaea | Archaea | 64.3 | 2.57e-9 | NR | WP_229774124.1 | 1383812 | g4698 | i0 | 90.6 | 0.293577981651376 | 32 | 3 | 29.4 | 0 | 325 | 230 | 534 | 565 | WP_229774124.1 SIR2 family protein [Halocalculus aciditolerans] | diamond | 96 | 64.3 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Halobacteria | Halobacteriales | Halobacteriaceae | Halocalculus | Halocalculus aciditolerans | |
| 27408273 | 27408273 | PRJNA358009_P_NODE_11503_length_174_cov_1.224000_g11434_i0 | PRJNA358009 | 11503 | 174 | 1.224 | 2.12976 | root | 1 | Root_unresolved | Root_unresolved | 115 | 3.51e-28 | NR | WP_068576323.1 | 54262 | g11434 | i0 | 96.5 | 18.6724137931034 | 57 | 2 | 98.3 | 0 | 2 | 172 | 310 | 366 | WP_068576323.1 DNA polymerase [Thermococcus chitonophagus] | diamond | 3249 | 115 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Thermococci | Thermococcales | Thermococcaceae | Thermococcus | Thermococcus chitonophagus | ||
| 28906268 | 28906268 | PRJNA358009_P_NODE_6768_length_325_cov_4.065217_g6705_i0 | PRJNA358009 | 6768 | 325 | 4.065217 | 13.21195525 | Methanofastidiosum sp. | 2666341 | Archaea | Archaea | 113 | 3.4300000000000005e-27 | NR | HQK63031.1 | 2666341 | g6705 | i0 | 59.6 | 0.96 | 104 | 3 | 96 | 1 | 317 | 6 | 7 | 71 | HQK63031.1 transposase [Methanofastidiosum sp.] | diamond | 312 | 113 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Candidatus Methanofastidiosia | Candidatus Methanofastidiosales | Candidatus Methanofastidiosaceae | Candidatus Methanofastidiosum | Methanofastidiosum sp. | |
| 29442983 | 29442983 | PRJNA358009_P_NODE_17890_length_154_cov_3.638095_g17821_i0 | PRJNA358009 | 17890 | 154 | 3.638095 | 5.6026663 | Candidatus Nanohaloarchaea archaeon | 2594798 | Archaea | Archaea | 72.8 | 2.78e-13 | NR | MFB6203993.1 | 2594798 | g17821 | i0 | 73.9 | 1.83116883116883 | 46 | 12 | 89.6 | 0 | 7 | 144 | 115 | 160 | MFB6203993.1 alkaline phosphatase family protein [Candidatus Nanohaloarchaea archaeon] | diamond | 282 | 72.8 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Candidatus Nanohaloarchaea | Candidatus Nanohaloarchaea archaeon | ||||
| 29712574 | 29712574 | PRJNA358009_P_NODE_7750_length_224_cov_1.165714_g7681_i0 | PRJNA358009 | 7750 | 224 | 1.165714 | 2.61119936 | root | 1 | Root_unresolved | Root_unresolved | 156 | 3.64e-42 | NR | WP_011248956.1 | 311400 | g7681 | i0 | 100 | 2.97321428571429 | 74 | 0 | 99.1 | 0 | 224 | 3 | 171 | 244 | WP_011248956.1 DNA polymerase [Thermococcus kodakarensis] | diamond | 666 | 156 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Thermococci | Thermococcales | Thermococcaceae | Thermococcus | Thermococcus kodakarensis | ||
| 32083474 | 32083474 | PRJNA358009_P_NODE_14958_length_163_cov_4.026316_g14889_i0 | PRJNA358009 | 14958 | 163 | 4.026316 | 6.56289508 | Halanaeroarchaeum | 1656823 | Archaea | Archaea | 71.2 | 7.71e-14 | NR | MFB6082319.1 | 1963275 | g14889 | i0 | 62.5 | 1.85889570552147 | 48 | 18 | 88.3 | 0 | 20 | 163 | 34 | 81 | MFB6082319.1 PH domain-containing protein [Halanaeroarchaeum sp.] | diamond | 303 | 71.2 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Halobacteria | Halobacteriales | Halobacteriaceae | Halanaeroarchaeum | Halanaeroarchaeum sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;