RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA358009", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Duplornaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA358009 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10602123 10602123 PRJNA358009_P_NODE_9729_length_184_cov_3.059259_g9660_i0 PRJNA358009 9729 184 3.059259 5.62903656 Chemarfal virus 260 3063286 Viruses Viruses 300 5.08e-77   NTclustered gi|2626079958|gb|OR270550.1| 3063286 g9660 i0 97.191 0.967391304347826 178 4 96 1 8 184 980 803 MAG: Chemarfal virus 260 isolate ML188 genomic sequence blastn 178 300 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales     Chemarfal virus 260
16975563 16975563 PRJNA358009_P_NODE_12714_length_168_cov_2.117647_g12645_i0 PRJNA358009 12714 168 2.117647 3.55764696 Chemarfal virus 260 3063286 Viruses Viruses 243 7.8e-60   NTclustered gi|2626079958|gb|OR270550.1| 3063286 g12645 i0 93.789 0.958333333333333 161 10 96 0 8 168 626 466 MAG: Chemarfal virus 260 isolate ML188 genomic sequence blastn 161 243 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales     Chemarfal virus 260
26853563 26853563 PRJNA358009_P_NODE_15321_length_163_cov_0.894737_g15252_i0 PRJNA358009 15321 163 0.894737 1.45842131 Malassezia restricta associated totivirus 1 3048757 Viruses Viruses 95.1 4.31e-21   NR CAI9858976.1 3048757 g15252 i0 92.5 0.975460122699387 53 4 97.5 0 161 3 207 259 CAI9858976.1 polyprotein, partial [Malassezia restricta associated totivirus 1] diamond 159 95.1 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia restricta associated totivirus 1
28274890 28274890 PRJNA358009_P_NODE_8966_length_189_cov_1.457143_g8897_i0 PRJNA358009 8966 189 1.457143 2.75400027 Totivirus sp. 2776824 Viruses Viruses 120 6.429999999999999e-31   NR QOQ37361.1 2776824 g8897 i0 88.5 0.968253968253968 61 7 96.8 0 184 2 216 276 QOQ37361.1 capsid protein, partial [Totivirus sp.] diamond 183 120 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;