RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA356682", tax_phylum = "Thermoplasmatota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA356682 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27864397 27864397 PRJNA356682_P_NODE_26225_length_287_cov_1.962617_g25534_i0 PRJNA356682 26225 287 1.962617 5.63271079 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 58.2 2.3e-7   NR MFL2966465.1 2670411 g25534 i0 67.5 0.418118466898955 40 13 41.8 0 121 2 1 40 MFL2966465.1 HAD-IA family hydrolase [Candidatus Thalassarchaeaceae archaeon] diamond 120 58.2 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
32382765 32382765 PRJNA356682_P_NODE_32339_length_262_cov_2.370370_g31648_i0 PRJNA356682 32339 262 2.37037 6.2103694 Thermoplasmatota archaeon 2806419 Archaea Archaea 46.2 0.00107   NR MCL5681076.1 2806419 g31648 i0 38.9 0.824427480916031 72 39 76.7 2 240 40 46 117 MCL5681076.1 OB-fold nucleic acid binding domain-containing protein [Thermoplasmatota archaeon] diamond 216 46.2 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;