RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA356682" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA356682 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8050997 8050997 PRJNA356682_P_NODE_35487_length_252_cov_1.553073_g34796_i0 PRJNA356682 35487 252 1.553073 3.91374396 Kneallhazia solenopsae 694064 Fungi Fungi 60.2 1.37e-4   NTclustered gi|36304139|gb|AY312502.1| 694064 g34796 i0 97.143 0.138888888888889 35 1 14 0 184 218 1613 1647 Thelohania solenopsae isolate Texas 3362 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 35 60.2 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Kneallhazia Kneallhazia solenopsae
23349426 23349426 PRJNA356682_P_NODE_26179_length_287_cov_3.238318_g25488_i0 PRJNA356682 26179 287 3.238318 9.29397266 Metchnikovellidae sp. 2893982 Fungi Fungi 54.7 0.007   NTclustered gi|2131667799|gb|OK155998.1| 2893982 g25488 i0 100 0.29616724738676 29 0 10 0 1 29 1937 1909 Metchnikovellidae sp. external transcribed spacer, partial sequence; small subunit ribosomal RNA gene and internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 85 54.7 1 Eukaryota Opisthokonta Fungi Microsporidia     Metchnikovellidae   Metchnikovellidae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;