RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA356682", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA356682 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18249556 18249556 PRJNA356682_P_NODE_44215_length_241_cov_2.750000_g43524_i0 PRJNA356682 44215 241 2.75 6.6275 Tolivirales sp. 2809914 Viruses Viruses 335 1.9199999999999993e-87   NTclustered gi|2647549416|gb|OR843641.1| 2809914 g43524 i0 91.701 1 241 20 100 0 1 241 3967 3727 Tolivirales sp. strain MR233-17E/1966 RNA-dependent RNA polymerase and hypothetical protein genes, partial cds; and hypothetical protein gene, complete cds blastn 241 335 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
22074261 22074261 PRJNA356682_P_NODE_34878_length_254_cov_1.558011_g34187_i0 PRJNA356682 34878 254 1.558011 3.95734794 Tolivirales sp. 2809914 Viruses Viruses 436 5.45e-118   NTclustered gi|2647549416|gb|OR843641.1| 2809914 g34187 i0 97.638 1 254 6 100 0 1 254 1772 1519 Tolivirales sp. strain MR233-17E/1966 RNA-dependent RNA polymerase and hypothetical protein genes, partial cds; and hypothetical protein gene, complete cds blastn 254 436 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;