RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA356682" and tax_phylum = "Kiritimatiellota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA356682 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5500834 5500834 PRJNA356682_P_NODE_12845_length_393_cov_0.962500_g12155_i0 PRJNA356682 12845 393 0.9625 3.782625 Kiritimatiella glycovorans 1307763 Bacteria Bacteria 348 4.28e-91   NTclustered gi|827038732|gb|CP010904.1| 1307763 g12155 i0 83.594 153.615776081425 384 50 95 13 19 393 588514 588135 Kiritimatiella glycovorans strain L21-Fru-AB chromosome, complete genome blastn 60371 348 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Kiritimatiellaceae Kiritimatiella Kiritimatiella glycovorans
6775593 6775593 PRJNA356682_P_NODE_46466_length_229_cov_2.500000_g45775_i0 PRJNA356682 46466 229 2.5 5.725 Kiritimatiella glycovorans 1307763 Bacteria Bacteria 183 6.939999999999998e-42   NTclustered gi|827038732|gb|CP010904.1| 1307763 g45775 i0 83.173 87.8558951965066 208 27 89 8 26 229 588482 588279 Kiritimatiella glycovorans strain L21-Fru-AB chromosome, complete genome blastn 20119 183 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Kiritimatiellaceae Kiritimatiella Kiritimatiella glycovorans
27990956 27990956 PRJNA356682_P_NODE_41825_length_244_cov_0.900585_g41134_i0 PRJNA356682 41825 244 0.900585 2.1974274 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 103 1.36e-23   NR MBQ3289897.1 2212473 g41134 i0 73.4 1.43852459016393 64 17 78.7 0 193 2 271 334 MBQ3289897.1 hypothetical protein [Kiritimatiellia bacterium] diamond 351 103 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
28527801 28527801 PRJNA356682_P_NODE_39227_length_247_cov_0.885057_g38536_i0 PRJNA356682 39227 247 0.885057 2.18609079 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 120 2.45e-29   NR MBR4653308.1 2212473 g38536 i0 74.4 0.995951417004049 82 21 99.6 0 1 246 226 307 MBR4653308.1 hypothetical protein [Kiritimatiellia bacterium] diamond 246 120 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
28590866 28590866 PRJNA356682_P_NODE_42867_length_243_cov_0.905882_g42176_i0 PRJNA356682 42867 243 0.905882 2.20129326 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 106 1.2e-24   NR MBR6587988.1 2212473 g42176 i0 61.3 0.987654320987654 80 31 98.8 0 241 2 222 301 MBR6587988.1 hypothetical protein [Kiritimatiellia bacterium] diamond 240 106 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
29380062 29380062 PRJNA356682_P_NODE_31369_length_266_cov_1.388601_g30678_i0 PRJNA356682 31369 266 1.388601 3.69367866 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 166 3.75e-49   NR MBQ9740321.1 2212473 g30678 i0 89.8 2.97744360902256 88 9 99.2 0 264 1 134 221 MBQ9740321.1 DUF1015 domain-containing protein [Kiritimatiellia bacterium] diamond 792 166 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
30580135 30580135 PRJNA356682_P_NODE_45073_length_241_cov_0.910714_g44382_i0 PRJNA356682 45073 241 0.910714 2.19482074 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 154 1.3899999999999996e-42   NR MBO7685043.1 2212473 g44382 i0 97.5 0.983402489626556 79 2 98.3 0 239 3 300 378 MBO7685043.1 AAA family ATPase [Kiritimatiellia bacterium] diamond 237 154 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
30706668 30706668 PRJNA356682_P_NODE_36014_length_251_cov_0.865169_g35323_i0 PRJNA356682 36014 251 0.865169 2.17157419 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 75.9 1.4e-15   NR MBQ4199826.1 2212473 g35323 i0 77.2 1.30278884462151 57 4 61 3 249 97 58 111 MBQ4199826.1 RNA-binding protein [Kiritimatiellia bacterium] diamond 327 75.9 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
32666948 32666948 PRJNA356682_P_NODE_42040_length_244_cov_0.900585_g41349_i0 PRJNA356682 42040 244 0.900585 2.1974274 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 147 7.14e-39   NR MCR5752455.1 2212473 g41349 i0 80 0.983606557377049 80 16 98.4 0 242 3 278 357 MCR5752455.1 hypothetical protein [Kiritimatiellia bacterium] diamond 240 147 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;